{"id":"W4400094663","doi":"10.1111/tid.14321","title":"Outcome of <i>Pneumocystis</i> pneumonia in transplant and non‐transplant HIV‐negative immunocompromised patients","year":2024,"lang":"en","type":"article","venue":"Transplant Infectious Disease","topic":"Pneumocystis jirovecii pneumonia detection and treatment","field":"Medicine","cited_by":7,"is_retracted":false,"has_abstract":true,"ca_institutions":"Sinai Health System; University of Toronto; University Health Network","funders":"","keywords":"Medicine; Internal medicine; Pneumocystis pneumonia; Pneumonia; Intensive care unit; Mechanical ventilation; Retrospective cohort study; Pneumocystis jirovecii","routes":{"ca_aff":true,"ca_fund":false,"ca_venue":false,"about_ca":false,"invisible_to_affiliation_only":false},"retraction":null,"screen":null,"direct_labels":[],"prediction":{"model_version":"codex-gemma-dda1882f352a","candidate_categories":["metaepi_narrow"],"consensus_categories":[],"category_scores_codex":[0.0001705346,0.0005806137,0.0008654907,0.0005890647,0.000110116,0.00005335279,0.0001136508,0.0001649255,0.00007627147],"category_scores_gemma":[0.00001648904,0.000496246,0.0003440721,0.0004962856,0.0001775689,0.0002018582,0.00001455269,0.0005065139,0.00006550977],"about_ca_system_candidate":false,"about_ca_system_consensus":false,"about_ca_system_score_codex":0.0001947114,"about_ca_system_score_gemma":0.0001636951,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_topic_score_codex":0.000320571,"about_ca_topic_score_gemma":0.0001478646,"domain_scores_codex":[0.9971178,0.000105473,0.0009671555,0.0007726748,0.0004876466,0.0005492686],"domain_scores_gemma":[0.998648,0.0002416076,0.00009875609,0.0003711786,0.00007234784,0.0005680769],"domain_codex":null,"domain_gemma":null,"domain_candidate":null,"domain_consensus":null,"study_design_codex":"observational","study_design_gemma":"observational","study_design_scores_codex":[0.002606321,0.001658183,0.9613263,0.002668939,0.0004081975,0.002895203,0.00169585,0.00007550941,0.02508403,0.0001466431,0.00001154992,0.001423289],"study_design_scores_gemma":[0.008886915,0.0007595157,0.9800954,0.002226131,0.00118153,0.0004153818,0.0000206726,0.001762807,0.003826849,0.0001654104,0.0001322267,0.0005271023],"study_design_candidate":"observational","study_design_consensus":"observational","genre_codex":"empirical","genre_gemma":"empirical","genre_scores_codex":[0.9934453,0.000630947,0.000341469,0.0002863067,0.0004295471,0.001620118,0.002012203,0.0003012907,0.0009328672],"genre_scores_gemma":[0.9980249,0.001002378,0.00003193038,0.0001539718,0.00004185528,0.0002230531,0.0003067185,0.00008041078,0.0001347405],"genre_candidate":"empirical","genre_consensus":"empirical","teacher_disagreement_score":0.02125718,"threshold_uncertainty_score":0.9997489,"prediction_status":"machine_predicted_unvalidated"},"machine_scores":{"provisional":true,"baseline":true,"maturity_gate_passed":false,"score_opus":0.007633921369384644,"score_gpt":0.2399064614783372,"score_spread":0.2322725401089525,"validation_status":"score_only:v0-immature-baseline","note":"Baseline scores from an immature model (maturity gate not passed). Scores rank; they never assert a category."}}