{"id":"W4400103440","doi":"10.1093/jambio/lxae155","title":"Evaluation of phenotypic and genotypic methods for the identification and characterization of bacterial isolates recovered from catheter-associated urinary tract infections","year":2024,"lang":"en","type":"article","venue":"Journal of Applied Microbiology","topic":"Urinary Tract Infections Management","field":"Medicine","cited_by":6,"is_retracted":false,"has_abstract":true,"ca_institutions":"","funders":"Trent University; Nottingham Trent University","keywords":"Genotype; Biology; Urinary system; Microbiology; Identification (biology); Phenotype; Genetics; Gene; Ecology","routes":{"ca_aff":false,"ca_fund":true,"ca_venue":false,"about_ca":false,"invisible_to_affiliation_only":true},"retraction":null,"screen":null,"direct_labels":[],"prediction":{"model_version":"metacan-v3-hybrid-931329e0061c","candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.01023363,0.0008256528,0.0007111361,0.002195271,0.0004465518,0.002144283,0.001126922,0.0009830737,0.0007105265],"category_scores_gemma":[0.02014344,0.0002857214,0.0005885157,0.001750921,0.0007595949,0.001017352,0.00145573,0.0006657848,0.0004227091],"about_ca_system_candidate":false,"about_ca_system_consensus":false,"about_ca_system_score_codex":0.0004608998,"about_ca_system_score_gemma":0.0007651424,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_topic_score_codex":0.001559646,"about_ca_topic_score_gemma":0.002864846,"domain_scores_codex":[0.978823,0.009530428,0.002502695,0.002186778,0.006418996,0.0005382227],"domain_scores_gemma":[0.9819233,0.007898982,0.003101417,0.001422858,0.005087523,0.000565888],"domain_codex":null,"domain_gemma":null,"domain_candidate":null,"domain_consensus":null,"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","study_design_scores_codex":[0.002507463,0.001743148,0.3605662,0.001339796,0.000509645,0.0002300626,0.001099633,0.001534097,0.5608987,0.0002921859,0.0003977247,0.0688814],"study_design_scores_gemma":[0.00008410907,0.01457537,0.4869388,0.0003272806,0.000874151,0.002187153,0.001921342,0.009220763,0.4792167,0.0003101984,0.004174384,0.0001697892],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","genre_codex":"empirical","genre_gemma":"empirical","genre_scores_codex":[0.9820896,0.002537106,0.0111257,0.0004225246,0.00009891928,0.0002882417,0.001239863,0.00007547433,0.002122435],"genre_scores_gemma":[0.9641168,0.001026775,0.03218558,0.0001374443,0.00004755739,0.0001812466,0.001640042,0.0000301693,0.0006344609],"genre_candidate":"empirical","genre_consensus":"empirical","teacher_disagreement_score":0.01023363,"threshold_uncertainty_score":0.05412126,"prediction_status":"machine_predicted_unvalidated"},"machine_scores":{"provisional":true,"baseline":true,"maturity_gate_passed":false,"score_opus":0.0266453132786274,"score_gpt":0.3218092768892127,"score_spread":0.2951639636105853,"validation_status":"score_only:v0-immature-baseline","note":"Baseline scores from an immature model (maturity gate not passed). Scores rank; they never assert a category."}}