{"id":"W4400120119","doi":"10.1128/msystems.00753-24","title":"Metatranscriptomic analysis reveals dissimilarity in viral community activity between an ice-free and ice-covered winter in Lake Erie","year":2024,"lang":"en","type":"article","venue":"mSystems","topic":"Bacteriophages and microbial interactions","field":"Environmental Science","cited_by":4,"is_retracted":false,"has_abstract":true,"ca_institutions":"University of Windsor","funders":"National Institute of Environmental Health Sciences; Biological and Environmental Research; Natural Sciences and Engineering Research Council of Canada; Office of Science; Joint Genome Institute; Simons Foundation; U.S. Department of Energy; National Institutes of Health; National Science Foundation","keywords":"Physical geography; Ice cream; Climatology; Geology; Oceanography; Geography; Biology","routes":{"ca_aff":true,"ca_fund":true,"ca_venue":false,"about_ca":false,"invisible_to_affiliation_only":false},"retraction":null,"screen":null,"direct_labels":[],"prediction":{"model_version":"codex-gemma-dda1882f352a","candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0007234034,0.0001697255,0.0003952483,0.0001531922,0.0001032032,0.0001736782,0.0002933054,0.000103799,0.0006321769],"category_scores_gemma":[0.00001918502,0.0001574462,0.0001166834,0.0005484875,0.00009523605,0.0007489868,0.0001779257,0.0005449806,0.00003109885],"about_ca_system_candidate":false,"about_ca_system_consensus":false,"about_ca_system_score_codex":0.0002115798,"about_ca_system_score_gemma":0.000007302855,"about_ca_topic_candidate":true,"about_ca_topic_consensus":true,"about_ca_topic_score_codex":0.01446196,"about_ca_topic_score_gemma":0.4265564,"domain_scores_codex":[0.9984477,0.000552962,0.0003179754,0.0003176657,0.000112117,0.0002515635],"domain_scores_gemma":[0.999265,0.0001034602,0.00005207608,0.0004842898,0.000003373512,0.00009181749],"domain_codex":null,"domain_gemma":null,"domain_candidate":null,"domain_consensus":null,"study_design_codex":"observational","study_design_gemma":"observational","study_design_scores_codex":[0.00006420191,0.0002590433,0.5574962,0.0001636019,0.0002777514,0.00003484504,0.004644348,0.0001075774,0.433152,0.00001323788,0.0006651506,0.003122038],"study_design_scores_gemma":[0.0002461068,0.00004877283,0.9909961,0.00007851785,0.0001589444,0.000004877674,0.0002147789,0.0006911247,0.0007885689,0.0001042081,0.006485695,0.0001822946],"study_design_candidate":"observational","study_design_consensus":"observational","genre_codex":"empirical","genre_gemma":"empirical","genre_scores_codex":[0.9969709,0.00006386382,0.0001868855,0.0002026543,0.0001829546,0.0002325659,0.0008660961,0.00004150357,0.001252599],"genre_scores_gemma":[0.9993224,0.00001033898,0.00005605895,0.00004586431,0.00003737969,0.00001984747,0.00006212395,0.00001417813,0.000431785],"genre_candidate":"empirical","genre_consensus":"empirical","teacher_disagreement_score":0.4334999,"threshold_uncertainty_score":0.9921008,"prediction_status":"machine_predicted_unvalidated"},"machine_scores":{"provisional":true,"baseline":true,"maturity_gate_passed":false,"score_opus":0.02314688139189337,"score_gpt":0.280568553721896,"score_spread":0.2574216723300026,"validation_status":"score_only:v0-immature-baseline","note":"Baseline scores from an immature model (maturity gate not passed). Scores rank; they never assert a category."}}