{"id":"W4400152213","doi":"10.1101/2024.06.27.600703","title":"Same trait, different genes: pelvic spine loss in three brook stickleback populations in Alberta, Canada","year":2024,"lang":"en","type":"preprint","venue":"bioRxiv (Cold Spring Harbor Laboratory)","topic":"Genetic and phenotypic traits in livestock","field":"Biochemistry, Genetics and Molecular Biology","cited_by":0,"is_retracted":false,"has_abstract":true,"ca_institutions":"Mount Royal University","funders":"","keywords":"Stickleback; Trait; SPINE (molecular biology); Biology; Geography; Ecology; Fishery; Fish <Actinopterygii>; Bioinformatics; Computer science","routes":{"ca_aff":true,"ca_fund":false,"ca_venue":false,"about_ca":true,"invisible_to_affiliation_only":false},"retraction":null,"screen":null,"direct_labels":[],"prediction":{"model_version":"metacan-v3-hybrid-931329e0061c","candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0003673653,0.000285269,0.0003181229,0.001560862,0.00219187,0.0005977087,0.0006411468,0.0003216793,0.001243752],"category_scores_gemma":[0.0003913782,0.0001719582,0.0003327968,0.001579355,0.0009629752,0.0001068815,0.0005337277,0.0003343962,0.00007918394],"about_ca_system_candidate":false,"about_ca_system_consensus":false,"about_ca_system_score_codex":0.005784767,"about_ca_system_score_gemma":0.003322121,"about_ca_topic_candidate":true,"about_ca_topic_consensus":true,"about_ca_topic_score_codex":0.8947363,"about_ca_topic_score_gemma":0.9699182,"domain_scores_codex":[0.9996645,0.00002317867,0.00001483859,0.0001023136,0.000113939,0.0000811654],"domain_scores_gemma":[0.9996481,0.00003820134,0.00005653513,0.00002223083,0.0001502148,0.00008469164],"domain_codex":null,"domain_gemma":null,"domain_candidate":null,"domain_consensus":null,"study_design_codex":"observational","study_design_gemma":"observational","study_design_scores_codex":[0.0003251792,0.00005485455,0.9477981,0.00003665304,0.0001555334,0.0006384751,0.003217159,0.0003394941,0.03660059,0.0002981254,0.000308781,0.01022698],"study_design_scores_gemma":[0.000005081463,0.00002111231,0.9983264,0.000004691784,0.00002195513,0.00006612114,0.0008508774,0.0001326569,0.0002437227,0.00002508864,0.0002968608,0.000005499771],"study_design_candidate":"observational","study_design_consensus":"observational","genre_codex":"empirical","genre_gemma":"empirical","genre_scores_codex":[0.9991226,0.00006280567,0.0001447613,0.00002061489,0.00000212173,0.00001169687,0.0002173092,0.000003693365,0.0004143479],"genre_scores_gemma":[0.9983025,0.00005799669,0.0004215015,0.000032641,0.000001296534,0.00001225266,0.0004209476,0.000003257791,0.0007476543],"genre_candidate":"empirical","genre_consensus":"empirical","teacher_disagreement_score":0.1052637,"threshold_uncertainty_score":0.2117671,"prediction_status":"machine_predicted_unvalidated"},"machine_scores":{"provisional":true,"baseline":true,"maturity_gate_passed":false,"score_opus":0.01388634028058631,"score_gpt":0.2236504029348834,"score_spread":0.2097640626542971,"validation_status":"score_only:v0-immature-baseline","note":"Baseline scores from an immature model (maturity gate not passed). Scores rank; they never assert a category."}}