{"id":"W4400192939","doi":"10.1136/gutjnl-2024-bsg.225","title":"P143 Evaluating intestinal biopsy preservation and storage methods to facilitate large-scale microbiome research in inflammatory bowel disease (IBD)","year":2024,"lang":"en","type":"article","venue":"Poster presentations","topic":"Microscopic Colitis","field":"Medicine","cited_by":0,"is_retracted":false,"has_abstract":true,"ca_institutions":"St. Thomas Hospital","funders":"","keywords":"Inflammatory bowel disease; Microbiome; Medicine; Scale (ratio); Intestinal Microbiome; Biopsy; Disease; Pathology; Bioinformatics; Biology; Cartography; Geography","routes":{"ca_aff":true,"ca_fund":false,"ca_venue":false,"about_ca":false,"invisible_to_affiliation_only":false},"retraction":null,"screen":null,"direct_labels":[],"prediction":{"model_version":"metacan-v3-hybrid-931329e0061c","candidate_categories":["metaresearch"],"consensus_categories":[],"category_scores_codex":[0.02541389,0.0006351552,0.0007851821,0.0008895527,0.0009604887,0.00337829,0.001178679,0.001418319,0.01502965],"category_scores_gemma":[0.03086995,0.0003807218,0.00124694,0.001218476,0.00104233,0.001605731,0.002368186,0.000863194,0.004313037],"about_ca_system_candidate":false,"about_ca_system_consensus":false,"about_ca_system_score_codex":0.0008590348,"about_ca_system_score_gemma":0.002874431,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_topic_score_codex":0.001629118,"about_ca_topic_score_gemma":0.002902712,"domain_scores_codex":[0.9894896,0.006380958,0.0007415589,0.0009316404,0.002054141,0.0004020444],"domain_scores_gemma":[0.9768667,0.009868938,0.004702234,0.002395625,0.004897117,0.001269431],"domain_codex":null,"domain_gemma":"methods","domain_candidate":"methods","domain_consensus":null,"study_design_codex":"design_other","study_design_gemma":"bench_or_experimental","study_design_scores_codex":[0.009724738,0.0009792956,0.2211505,0.01050654,0.000930506,0.0009712884,0.001943759,0.002332839,0.126871,0.002865275,0.05783877,0.5638856],"study_design_scores_gemma":[0.0009701728,0.01772711,0.54905,0.006760588,0.001428249,0.003992096,0.003864456,0.01031102,0.1539542,0.007801344,0.2437489,0.0003919823],"study_design_candidate":"bench_or_experimental","study_design_consensus":null,"genre_codex":"empirical","genre_gemma":"empirical","genre_scores_codex":[0.7270246,0.02673859,0.1560969,0.02138622,0.003464398,0.007576961,0.01860845,0.002885199,0.03621866],"genre_scores_gemma":[0.7412589,0.00836646,0.2190452,0.005895998,0.001372912,0.006406793,0.009068356,0.001193005,0.007392373],"genre_candidate":"empirical","genre_consensus":"empirical","teacher_disagreement_score":0.9745861,"threshold_uncertainty_score":0.1344031,"prediction_status":"machine_predicted_unvalidated"},"machine_scores":{"provisional":true,"baseline":true,"maturity_gate_passed":false,"score_opus":0.1668593057440433,"score_gpt":0.4778757361889769,"score_spread":0.3110164304449337,"validation_status":"score_only:v0-immature-baseline","note":"Baseline scores from an immature model (maturity gate not passed). Scores rank; they never assert a category."}}