{"id":"W4400215685","doi":"10.1007/978-1-0716-3981-8_12","title":"Phylogenetic Survival Analysis","year":2024,"lang":"en","type":"article","venue":"Methods in molecular biology","topic":"Genetic diversity and population structure","field":"Biochemistry, Genetics and Molecular Biology","cited_by":0,"is_retracted":false,"has_abstract":false,"ca_institutions":"Institute of Infection and Immunity","funders":"","keywords":"Phylogenetic tree; Evolutionary biology; Biology; Zoology; Genetics; Gene","routes":{"ca_aff":true,"ca_fund":false,"ca_venue":false,"about_ca":false,"invisible_to_affiliation_only":false},"retraction":null,"screen":null,"direct_labels":[],"prediction":{"model_version":"metacan-v3-hybrid-931329e0061c","candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.004138947,0.0009481474,0.001066557,0.004395864,0.001539523,0.001329908,0.001456813,0.0007942826,0.03354026],"category_scores_gemma":[0.01135707,0.000280828,0.002496405,0.002823791,0.0007689053,0.000863032,0.001269897,0.00194345,0.00733667],"about_ca_system_candidate":false,"about_ca_system_consensus":false,"about_ca_system_score_codex":0.0008484045,"about_ca_system_score_gemma":0.001576377,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_topic_score_codex":0.003463683,"about_ca_topic_score_gemma":0.003125125,"domain_scores_codex":[0.9979591,0.0007088851,0.00009393464,0.0006305184,0.0002625588,0.0003449551],"domain_scores_gemma":[0.9939132,0.003532708,0.000314446,0.001077694,0.0008906045,0.0002712059],"domain_codex":null,"domain_gemma":null,"domain_candidate":null,"domain_consensus":null,"study_design_codex":"design_other","study_design_gemma":"theoretical_or_conceptual","study_design_scores_codex":[0.001059544,0.0002648859,0.08799407,0.0004396507,0.001196016,0.0005098204,0.000696685,0.0620577,0.009421947,0.1279031,0.04169109,0.6667655],"study_design_scores_gemma":[0.0001010316,0.0006029326,0.0740068,0.0001630686,0.0007568617,0.001591761,0.0007852094,0.7090642,0.007521709,0.1367993,0.0684735,0.0001335799],"study_design_candidate":"theoretical_or_conceptual","study_design_consensus":null,"genre_codex":"methods","genre_gemma":"methods","genre_scores_codex":[0.1177731,0.0004322504,0.8545457,0.0004023885,0.0002725904,0.0002422567,0.008669732,0.003651987,0.01400999],"genre_scores_gemma":[0.8008497,0.0002056063,0.1656628,0.0001803419,0.000181313,0.000635882,0.01227403,0.001237341,0.01877294],"genre_candidate":"methods","genre_consensus":"methods","teacher_disagreement_score":0.03354026,"threshold_uncertainty_score":0.1122033,"prediction_status":"machine_predicted_unvalidated"},"machine_scores":{"provisional":true,"baseline":true,"maturity_gate_passed":false,"score_opus":0.02148777581447908,"score_gpt":0.3796725957330593,"score_spread":0.3581848199185803,"validation_status":"score_only:v0-immature-baseline","note":"Baseline scores from an immature model (maturity gate not passed). Scores rank; they never assert a category."}}