{"id":"W4400227269","doi":"10.1038/s41598-024-66048-3","title":"Mosquitocidal toxin-like islands in Bacillus thuringiensis S2160-1 revealed by complete-genome sequence and MS proteomic analysis","year":2024,"lang":"en","type":"article","venue":"Scientific Reports","topic":"Insect Resistance and Genetics","field":"Biochemistry, Genetics and Molecular Biology","cited_by":4,"is_retracted":false,"has_abstract":true,"ca_institutions":"","funders":"Guangxi University; Natural Science Foundation of Guangxi Province; Harbin Institute of Technology; Lakehead University; National Natural Science Foundation of China; University of Sussex; Natural Science Foundation of Guangxi Zhuang Autonomous Region; Johns Hopkins University","keywords":"Bacillus thuringiensis; Plasmid; Biology; Genome; Pathogenicity island; Whole genome sequencing; Proteome; Gene; Genetics; Toxin; Bacteria","routes":{"ca_aff":false,"ca_fund":true,"ca_venue":false,"about_ca":false,"invisible_to_affiliation_only":true},"retraction":null,"screen":null,"direct_labels":[],"prediction":{"model_version":"metacan-v3-hybrid-931329e0061c","candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00005856601,0.0004213873,0.0003335105,0.0004385622,0.0001801922,0.0003459453,0.0001194682,0.0002211889,0.0008623424],"category_scores_gemma":[0.0001330956,0.0001091106,0.0004516769,0.0005034009,0.0001552751,0.000180004,0.0002198387,0.0003938886,0.0005896711],"about_ca_system_candidate":false,"about_ca_system_consensus":false,"about_ca_system_score_codex":0.0003151282,"about_ca_system_score_gemma":0.000237587,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_topic_score_codex":0.001906923,"about_ca_topic_score_gemma":0.001713889,"domain_scores_codex":[0.9999472,0.000003749706,0.000004800514,0.00001286499,0.00002213396,0.000009309315],"domain_scores_gemma":[0.9998637,0.00001579269,0.00005802466,0.00001170487,0.00001907509,0.00003160422],"domain_codex":null,"domain_gemma":null,"domain_candidate":null,"domain_consensus":null,"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","study_design_scores_codex":[0.0001703298,0.00001938632,0.001309955,0.00007058537,0.000007935252,0.0001766396,0.00003249769,0.00006621428,0.9960915,0.00003646097,0.00006906385,0.001949444],"study_design_scores_gemma":[0.00006408895,0.000603563,0.3777453,0.0000620703,0.0001986587,0.002551325,0.0003177446,0.002478912,0.5996665,0.000375414,0.01589665,0.00003961712],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","genre_codex":"empirical","genre_gemma":"empirical","genre_scores_codex":[0.9915815,0.001330677,0.001566848,0.0001343358,0.00001986922,0.00002603727,0.004239382,0.00009629378,0.001004979],"genre_scores_gemma":[0.9596412,0.001732236,0.005411557,0.0001448871,0.00003133854,0.00004798386,0.03026437,0.00007895907,0.002647543],"genre_candidate":"empirical","genre_consensus":"empirical","teacher_disagreement_score":0.001906923,"threshold_uncertainty_score":0.00379169,"prediction_status":"machine_predicted_unvalidated"},"machine_scores":{"provisional":true,"baseline":true,"maturity_gate_passed":false,"score_opus":0.0104968293494334,"score_gpt":0.2442022507224677,"score_spread":0.2337054213730343,"validation_status":"score_only:v0-immature-baseline","note":"Baseline scores from an immature model (maturity gate not passed). Scores rank; they never assert a category."}}