{"id":"W4400257802","doi":"10.1016/j.egg.2024.100277","title":"Comparative genomics analysis of Mycoplasma capricolum subsp. capricolum MOR20","year":2024,"lang":"en","type":"article","venue":"Ecological Genetics and Genomics","topic":"Microbial infections and disease research","field":"Immunology and Microbiology","cited_by":0,"is_retracted":false,"has_abstract":false,"ca_institutions":"NOSM University; Laurentian University","funders":"Ministry of Communications and Information, Singapore","keywords":"Biology; Genomics; Computational biology; Genetics; Genome; Gene","routes":{"ca_aff":true,"ca_fund":false,"ca_venue":false,"about_ca":false,"invisible_to_affiliation_only":false},"retraction":null,"screen":null,"direct_labels":[],"prediction":{"model_version":"codex-gemma-dda1882f352a","candidate_categories":["insufficient_payload"],"consensus_categories":[],"category_scores_codex":[0.0002379515,0.0001970494,0.0005765258,0.0003500764,0.0002044082,0.00008051252,0.0001777416,0.0002987161,0.00130278],"category_scores_gemma":[0.00002083999,0.0001751558,0.0002405089,0.0006671745,0.0003913521,0.00002677172,0.0002284762,0.000283649,0.000170459],"about_ca_system_candidate":false,"about_ca_system_consensus":false,"about_ca_system_score_codex":0.0001080872,"about_ca_system_score_gemma":0.0001657287,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_topic_score_codex":0.00007503809,"about_ca_topic_score_gemma":0.0002837629,"domain_scores_codex":[0.9985949,0.0001350764,0.0003752073,0.0004567452,0.00003821303,0.000399836],"domain_scores_gemma":[0.9992386,0.0002610064,0.00007245036,0.0002413982,0.0001033695,0.00008319836],"domain_codex":null,"domain_gemma":null,"domain_candidate":null,"domain_consensus":null,"study_design_codex":"bench_or_experimental","study_design_gemma":"not_applicable","study_design_scores_codex":[0.0001212181,0.0006917541,0.01118331,0.0001080131,0.005642875,0.00003065683,0.001231598,0.006137169,0.9630069,0.003202033,0.005417861,0.003226617],"study_design_scores_gemma":[0.002324144,0.002310142,0.2920208,0.00003911062,0.006286492,0.0001630094,0.001737121,0.04424001,0.1190732,0.002146316,0.5278692,0.001790485],"study_design_candidate":"bench_or_experimental","study_design_consensus":null,"genre_codex":"empirical","genre_gemma":"empirical","genre_scores_codex":[0.9856994,0.01166229,0.0003176424,0.0001119583,0.0003484366,0.0003113043,0.0003884718,0.00004183891,0.001118696],"genre_scores_gemma":[0.9956874,0.002655166,0.000283819,0.00006594364,0.00003606985,0.00002261197,0.0001717667,0.00001262788,0.001064547],"genre_candidate":"empirical","genre_consensus":"empirical","teacher_disagreement_score":0.8439338,"threshold_uncertainty_score":0.9996102,"prediction_status":"machine_predicted_unvalidated"},"machine_scores":{"provisional":true,"baseline":true,"maturity_gate_passed":false,"score_opus":0.02806794473004822,"score_gpt":0.2913761768011552,"score_spread":0.263308232071107,"validation_status":"score_only:v0-immature-baseline","note":"Baseline scores from an immature model (maturity gate not passed). Scores rank; they never assert a category."}}