{"id":"W4400386830","doi":"10.1101/2024.07.04.602123","title":"Discovery of a novel <i>Trichuris</i> species, <i>T. incognita</i> , with low sensitivity to albendazole-ivermectin treatment in Côte d’Ivoire patients, identified through fecal DNA metabarcoding","year":2024,"lang":"en","type":"preprint","venue":"bioRxiv (Cold Spring Harbor Laboratory)","topic":"Parasite Biology and Host Interactions","field":"Environmental Science","cited_by":1,"is_retracted":false,"has_abstract":true,"ca_institutions":"University of Calgary","funders":"","keywords":"Ivermectin; Albendazole; Trichuris; Feces; Veterinary medicine; Cote d ivoire; Refractory (planetary science); Biology; Microbiology; Medicine; Zoology; Humanities","routes":{"ca_aff":true,"ca_fund":false,"ca_venue":false,"about_ca":false,"invisible_to_affiliation_only":false},"retraction":null,"screen":null,"direct_labels":[],"prediction":{"model_version":"metacan-v3-hybrid-931329e0061c","candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0001385098,0.0003053408,0.0002221262,0.0004780017,0.0002354234,0.0004538201,0.0001840211,0.0003592863,0.0007988182],"category_scores_gemma":[0.0003423029,0.0001793504,0.0002367826,0.0003517698,0.0002023483,0.0001089031,0.0001589649,0.0002204869,0.0002063947],"about_ca_system_candidate":false,"about_ca_system_consensus":false,"about_ca_system_score_codex":0.0002535588,"about_ca_system_score_gemma":0.0001796881,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_topic_score_codex":0.004742872,"about_ca_topic_score_gemma":0.00512654,"domain_scores_codex":[0.9998795,0.00001264291,0.0000110796,0.00004735778,0.00001840975,0.00003105053],"domain_scores_gemma":[0.9997963,0.00003133906,0.00008268366,0.0000128953,0.00004001773,0.00003667354],"domain_codex":null,"domain_gemma":null,"domain_candidate":null,"domain_consensus":null,"study_design_codex":"bench_or_experimental","study_design_gemma":"observational","study_design_scores_codex":[0.00038234,0.00005451179,0.2305411,0.0001309035,0.00005051927,0.002441923,0.0003598017,0.0001122538,0.754696,0.00006586587,0.0004752976,0.01068946],"study_design_scores_gemma":[0.00003141787,0.0005655321,0.9155377,0.00005982464,0.0001311817,0.0136254,0.0009041242,0.001364093,0.0623972,0.00007526641,0.005290409,0.00001779815],"study_design_candidate":"observational","study_design_consensus":null,"genre_codex":"empirical","genre_gemma":"empirical","genre_scores_codex":[0.9977067,0.0003271076,0.0007629991,0.0001302604,0.00001276699,0.00002275567,0.000549996,0.00001728177,0.0004701304],"genre_scores_gemma":[0.9970376,0.0001726568,0.001554501,0.0000884056,0.00001059895,0.00001013097,0.0007431939,0.000008263393,0.0003746899],"genre_candidate":"empirical","genre_consensus":"empirical","teacher_disagreement_score":0.004742872,"threshold_uncertainty_score":0.009430528,"prediction_status":"machine_predicted_unvalidated"},"machine_scores":{"provisional":true,"baseline":true,"maturity_gate_passed":false,"score_opus":0.01328440592542953,"score_gpt":0.2491494426013135,"score_spread":0.235865036675884,"validation_status":"score_only:v0-immature-baseline","note":"Baseline scores from an immature model (maturity gate not passed). Scores rank; they never assert a category."}}