{"id":"W4400412326","doi":"10.1093/gbe/evae095","title":"Genome-Wide Gene Birth–Death Dynamics Are Associated with Diet Breadth Variation in Lepidoptera","year":2024,"lang":"en","type":"article","venue":"Genome Biology and Evolution","topic":"Plant and animal studies","field":"Agricultural and Biological Sciences","cited_by":9,"is_retracted":false,"has_abstract":true,"ca_institutions":"University of British Columbia","funders":"Vetenskapsrådet; Stockholms Universitet; Matemaattis-luonnontieteellinen tiedekunta, Helsingin Yliopisto","keywords":"Biology; Gene family; Gene; Lepidoptera genitalia; Genome; Evolutionary biology; Genetics; Phylogenetics; Phylogenetic tree; Generalist and specialist species; Ecology","routes":{"ca_aff":true,"ca_fund":false,"ca_venue":false,"about_ca":false,"invisible_to_affiliation_only":false},"retraction":null,"screen":null,"direct_labels":[],"prediction":{"model_version":"codex-gemma-dda1882f352a","candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0001929934,0.000126683,0.0001684329,0.00001822614,0.000175469,0.00003036717,0.00006304326,0.0001383968,0.00002657561],"category_scores_gemma":[0.00002354212,0.00004712007,0.00002887432,0.0002429435,0.00004513049,0.00007513438,0.00004215839,0.0001102035,0.0000154639],"about_ca_system_candidate":false,"about_ca_system_consensus":false,"about_ca_system_score_codex":0.0001246667,"about_ca_system_score_gemma":0.000005989442,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_topic_score_codex":0.0002718433,"about_ca_topic_score_gemma":0.009040612,"domain_scores_codex":[0.9992149,0.00006342303,0.0001375727,0.0002876873,0.00004764063,0.0002488029],"domain_scores_gemma":[0.9997459,0.0001263729,0.00005129167,0.00001366073,0.00002700253,0.00003576157],"domain_codex":null,"domain_gemma":null,"domain_candidate":null,"domain_consensus":null,"study_design_codex":"observational","study_design_gemma":"observational","study_design_scores_codex":[0.0001179021,0.00004322364,0.9180444,0.000009159802,0.0000594434,0.00001354895,0.00009490723,0.00001029862,0.07941142,0.0006760618,0.000006606092,0.001512992],"study_design_scores_gemma":[0.0000806705,0.0003783955,0.9964821,0.00002318455,0.00001352895,0.000004955406,0.00005871995,0.0004959409,0.000005460638,0.0009889122,0.001328597,0.0001395306],"study_design_candidate":"observational","study_design_consensus":"observational","genre_codex":"empirical","genre_gemma":"empirical","genre_scores_codex":[0.9955088,0.003061081,0.00004743297,0.000622349,0.00005575484,0.000113843,0.0002968664,0.00007410376,0.0002197312],"genre_scores_gemma":[0.9986547,0.0005174273,0.00001490133,0.00005154155,0.0001372576,0.00001335884,0.0004755483,7.135561e-7,0.0001345832],"genre_candidate":"empirical","genre_consensus":"empirical","teacher_disagreement_score":0.07940596,"threshold_uncertainty_score":0.5044873,"prediction_status":"machine_predicted_unvalidated"},"machine_scores":{"provisional":true,"baseline":true,"maturity_gate_passed":false,"score_opus":0.01833158090472913,"score_gpt":0.1941466124122524,"score_spread":0.1758150315075233,"validation_status":"score_only:v0-immature-baseline","note":"Baseline scores from an immature model (maturity gate not passed). Scores rank; they never assert a category."}}