{"id":"W4400451719","doi":"10.1089/phage.2023.0041","title":"The TolC and Lipopolysaccharide-Specific <i>Escherichia coli</i> Bacteriophage TLS—the <i>Tlsvirus</i> Archetype Virus","year":2024,"lang":"en","type":"article","venue":"PHAGE","topic":"Bacteriophages and microbial interactions","field":"Environmental Science","cited_by":6,"is_retracted":false,"has_abstract":true,"ca_institutions":"University of Guelph; St Joseph's Health Centre; University of Toronto","funders":"School of Life Sciences, Arizona State University; University of Toronto; National Institute of General Medical Sciences; Arizona State University","keywords":"Escherichia coli; Archetype; Lipopolysaccharide; Bacteriophage; Microbiology; Virology; Virus; Biology; Philosophy; Genetics; Immunology; Gene","routes":{"ca_aff":true,"ca_fund":true,"ca_venue":false,"about_ca":false,"invisible_to_affiliation_only":false},"retraction":null,"screen":null,"direct_labels":[],"prediction":{"model_version":"metacan-v3-hybrid-931329e0061c","candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0001668808,0.0003884096,0.0001968088,0.0007059308,0.0002235581,0.0004344737,0.0002129166,0.0002389601,0.001881471],"category_scores_gemma":[0.0002403418,0.0001231628,0.0004825391,0.0004430873,0.0002423044,0.0002255277,0.0003723406,0.0004333538,0.0006147939],"about_ca_system_candidate":false,"about_ca_system_consensus":false,"about_ca_system_score_codex":0.0004028933,"about_ca_system_score_gemma":0.0004600276,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_topic_score_codex":0.001287096,"about_ca_topic_score_gemma":0.0008462354,"domain_scores_codex":[0.9998032,0.00002166697,0.00001647088,0.00004837097,0.00005711252,0.00005317353],"domain_scores_gemma":[0.9998714,0.00001881923,0.00004060455,0.00001457016,0.00001646984,0.0000381737],"domain_codex":null,"domain_gemma":null,"domain_candidate":null,"domain_consensus":null,"study_design_codex":"bench_or_experimental","study_design_gemma":"observational","study_design_scores_codex":[0.0004861291,0.0000436913,0.004837953,0.0001858655,0.0000192544,0.0001395794,0.00006383858,0.0001570474,0.9843774,0.0003941296,0.0001773399,0.0091178],"study_design_scores_gemma":[0.00004358773,0.0007233794,0.04817134,0.00006275902,0.00007747266,0.00132286,0.0003828475,0.001472597,0.9250626,0.00033682,0.02231633,0.00002740996],"study_design_candidate":"observational","study_design_consensus":null,"genre_codex":"empirical","genre_gemma":"empirical","genre_scores_codex":[0.9871114,0.00099569,0.006620022,0.00007358247,0.00004005347,0.00007404425,0.002450336,0.0002274158,0.002407508],"genre_scores_gemma":[0.9684991,0.0006455246,0.01044407,0.00007566928,0.00001401109,0.000054413,0.01494257,0.00006421215,0.005260545],"genre_candidate":"empirical","genre_consensus":"empirical","teacher_disagreement_score":0.001881471,"threshold_uncertainty_score":0.006294191,"prediction_status":"machine_predicted_unvalidated"},"machine_scores":{"provisional":true,"baseline":true,"maturity_gate_passed":false,"score_opus":0.009666008014899337,"score_gpt":0.2284276671314858,"score_spread":0.2187616591165865,"validation_status":"score_only:v0-immature-baseline","note":"Baseline scores from an immature model (maturity gate not passed). Scores rank; they never assert a category."}}