{"id":"W4400722311","doi":"10.1139/gen-2024-0052","title":"An analysis of the gaps in the South African DNA barcoding library of ticks of veterinary and public health importance","year":2024,"lang":"en","type":"review","venue":"Genome","topic":"Vector-borne infectious diseases","field":"Immunology and Microbiology","cited_by":8,"is_retracted":false,"has_abstract":true,"ca_institutions":"","funders":"","keywords":"Biology; DNA barcoding; Tick; Barcode; Biodiversity; Taxonomy (biology); Hyalomma; Species complex; Ecology; Zoology; Ixodidae; Phylogenetic tree","routes":{"ca_aff":false,"ca_fund":false,"ca_venue":true,"about_ca":false,"invisible_to_affiliation_only":true},"retraction":null,"screen":null,"direct_labels":[],"prediction":{"model_version":"codex-gemma-dda1882f352a","candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0004245927,0.0002051003,0.001271201,0.0005160882,0.00004865911,0.00001250641,0.0005165806,0.0001480927,0.0001312184],"category_scores_gemma":[0.00003680545,0.0001158245,0.0004185043,0.00132286,0.0002968499,0.00005897462,0.0001810372,0.0002835953,0.000003170578],"about_ca_system_candidate":false,"about_ca_system_consensus":false,"about_ca_system_score_codex":0.00003424209,"about_ca_system_score_gemma":0.0004301032,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_topic_score_codex":0.00007146465,"about_ca_topic_score_gemma":0.00002934863,"domain_scores_codex":[0.9978743,0.000862509,0.0006931447,0.0002901141,0.00004325716,0.0002366586],"domain_scores_gemma":[0.9985404,0.0001468276,0.0006232568,0.0006492712,0.00001722076,0.00002303848],"domain_codex":null,"domain_gemma":null,"domain_candidate":null,"domain_consensus":null,"study_design_codex":"design_other","study_design_gemma":"not_applicable","study_design_scores_codex":[0.0002279562,0.004094614,0.1865048,0.1882753,0.05866132,0.0001401674,0.07611959,0.00003891056,0.008648293,0.01104203,0.0008680752,0.465379],"study_design_scores_gemma":[0.0006252819,0.001814113,0.1621635,0.005264139,0.01578639,0.0002474572,0.005835481,0.000003953425,0.00002269883,0.0002230384,0.807072,0.0009419656],"study_design_candidate":"not_applicable","study_design_consensus":null,"genre_codex":"review","genre_gemma":"empirical","genre_scores_codex":[0.09303794,0.9055027,8.702846e-7,0.00005156471,0.00007867281,0.000335551,0.0008337828,0.00001426318,0.0001446718],"genre_scores_gemma":[0.5146668,0.4850753,0.00000282886,0.00003012242,0.000009954083,0.0000189867,0.0001620852,0.00001526107,0.00001869065],"genre_candidate":"review","genre_consensus":null,"teacher_disagreement_score":0.806204,"threshold_uncertainty_score":0.4723188,"prediction_status":"machine_predicted_unvalidated"},"machine_scores":{"provisional":true,"baseline":true,"maturity_gate_passed":false,"score_opus":0.04526287280529915,"score_gpt":0.3021799009778774,"score_spread":0.2569170281725782,"validation_status":"score_only:v0-immature-baseline","note":"Baseline scores from an immature model (maturity gate not passed). Scores rank; they never assert a category."}}