{"id":"W4401289840","doi":"10.1002/path.6329","title":"The unique metabolome of clear cell ovarian carcinoma","year":2024,"lang":"en","type":"article","venue":"The Journal of Pathology","topic":"Epigenetics and DNA Methylation","field":"Biochemistry, Genetics and Molecular Biology","cited_by":6,"is_retracted":false,"has_abstract":true,"ca_institutions":"McGill University Health Centre; BC Children's Hospital; BC Cancer Agency; University of British Columbia","funders":"Canadian Institutes of Health Research; Canadian Cancer Society","keywords":"Metabolome; Ovarian carcinoma; Carcinoma; Medicine; Metabolomics; Computational biology; Ovarian cancer; Biology; Bioinformatics; Pathology; Internal medicine; Cancer","routes":{"ca_aff":true,"ca_fund":true,"ca_venue":false,"about_ca":false,"invisible_to_affiliation_only":false},"retraction":null,"screen":null,"direct_labels":[],"prediction":{"model_version":"codex-gemma-dda1882f352a","candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.001319139,0.00006614943,0.0001097106,0.00003491435,0.00005839267,0.00001095448,0.0002314629,0.00008584952,0.000007331696],"category_scores_gemma":[0.0000639611,0.00003437304,0.00009472329,0.00006907225,0.0001185598,0.000002045908,0.00005680793,0.0001531579,0.000002828971],"about_ca_system_candidate":false,"about_ca_system_consensus":false,"about_ca_system_score_codex":0.000004688415,"about_ca_system_score_gemma":0.0000828616,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_topic_score_codex":0.000004946648,"about_ca_topic_score_gemma":0.000006429106,"domain_scores_codex":[0.9991445,0.0003192431,0.0002751222,0.00006620754,0.00008414311,0.0001107887],"domain_scores_gemma":[0.9994171,0.00008524269,0.0001551086,0.0002057132,0.0001090272,0.00002775779],"domain_codex":null,"domain_gemma":null,"domain_candidate":null,"domain_consensus":null,"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","study_design_scores_codex":[0.00008899051,0.00001321313,0.0003093594,0.000009876882,0.00002851851,0.0000233588,0.0001906389,0.00008403447,0.9961401,0.0007030574,0.0002496475,0.002159241],"study_design_scores_gemma":[0.0002178636,0.000860149,0.006186843,0.000007946132,0.00009625865,0.0002277033,0.000180023,0.00006781106,0.9322678,0.002952398,0.05686857,0.00006656587],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","genre_codex":"empirical","genre_gemma":"empirical","genre_scores_codex":[0.9651771,0.02916306,0.003694132,0.0006093215,0.0004006744,0.00004857087,0.000004299226,0.000001597536,0.0009012377],"genre_scores_gemma":[0.995686,0.003326513,0.0003642588,0.00004308828,0.0002269498,6.545421e-7,0.000001713982,0.00001102965,0.0003398023],"genre_candidate":"empirical","genre_consensus":"empirical","teacher_disagreement_score":0.0638722,"threshold_uncertainty_score":0.1401692,"prediction_status":"machine_predicted_unvalidated"},"machine_scores":{"provisional":true,"baseline":true,"maturity_gate_passed":false,"score_opus":0.00823172038802412,"score_gpt":0.2473736716655737,"score_spread":0.2391419512775496,"validation_status":"score_only:v0-immature-baseline","note":"Baseline scores from an immature model (maturity gate not passed). Scores rank; they never assert a category."}}