{"id":"W4401478626","doi":"10.1101/2024.08.09.607374","title":"Infectious subgenomic amplicon strategies for Japanese encephalitis and West Nile viruses","year":2024,"lang":"en","type":"preprint","venue":"bioRxiv (Cold Spring Harbor Laboratory)","topic":"Mosquito-borne diseases and control","field":"Medicine","cited_by":1,"is_retracted":false,"has_abstract":true,"ca_institutions":"University of Saskatchewan","funders":"","keywords":"Virology; Subgenomic mRNA; West Nile virus; Amplicon; Encephalitis; Japanese encephalitis; Biology; Virus; CRISPR; Genetics; Polymerase chain reaction; Gene","routes":{"ca_aff":true,"ca_fund":false,"ca_venue":false,"about_ca":false,"invisible_to_affiliation_only":false},"retraction":null,"screen":null,"direct_labels":[],"prediction":{"model_version":"metacan-v3-hybrid-931329e0061c","candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0004297006,0.0006086905,0.0003401114,0.0005262606,0.0001825876,0.0004433065,0.0005781995,0.0004447523,0.0008317176],"category_scores_gemma":[0.0003154489,0.0003246992,0.0005099105,0.0002859535,0.0003031133,0.0003536906,0.0006393002,0.0008557176,0.0004520546],"about_ca_system_candidate":false,"about_ca_system_consensus":false,"about_ca_system_score_codex":0.0005936488,"about_ca_system_score_gemma":0.0002871759,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_topic_score_codex":0.0006456453,"about_ca_topic_score_gemma":0.001115362,"domain_scores_codex":[0.9995371,0.00008095184,0.00005016199,0.00007924259,0.0001729718,0.00007952892],"domain_scores_gemma":[0.9997231,0.00004258237,0.0001081061,0.00004058924,0.00004859008,0.00003691539],"domain_codex":null,"domain_gemma":null,"domain_candidate":null,"domain_consensus":null,"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","study_design_scores_codex":[0.00003022234,0.00002088264,0.0001222034,0.00006327445,0.000006286463,0.00004136932,0.0000331222,0.0002508017,0.996583,0.0003294297,0.000026878,0.002492499],"study_design_scores_gemma":[0.000009553174,0.0003532394,0.0007178119,0.000007573221,0.0000334442,0.0002018079,0.0000333278,0.001471465,0.9928386,0.0001138926,0.004209125,0.00001005981],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","genre_codex":"empirical","genre_gemma":"empirical","genre_scores_codex":[0.8927209,0.002588353,0.1003579,0.0001601811,0.00007789902,0.0003788937,0.0005058176,0.0003405953,0.002869464],"genre_scores_gemma":[0.9176404,0.002165597,0.07244579,0.0001180172,0.00001716618,0.0002783644,0.001800036,0.0001475593,0.00538709],"genre_candidate":"empirical","genre_consensus":"empirical","teacher_disagreement_score":0.0008317176,"threshold_uncertainty_score":0.00430721,"prediction_status":"machine_predicted_unvalidated"},"machine_scores":{"provisional":true,"baseline":true,"maturity_gate_passed":false,"score_opus":0.01469994656358635,"score_gpt":0.2528151032481615,"score_spread":0.2381151566845751,"validation_status":"score_only:v0-immature-baseline","note":"Baseline scores from an immature model (maturity gate not passed). Scores rank; they never assert a category."}}