{"id":"W4401482339","doi":"10.21203/rs.3.rs-4712499/v1","title":"HIV Phylogenetic Clusters Point to Unmet HIV Prevention, Testing and Treatment Needs Among Men Who Have Sex with Men in Kenya","year":2024,"lang":"en","type":"preprint","venue":"Research Square","topic":"HIV/AIDS Research and Interventions","field":"Medicine","cited_by":0,"is_retracted":false,"has_abstract":false,"ca_institutions":"University of Toronto; University of Manitoba; Public Health Agency of Canada","funders":"","keywords":"Human immunodeficiency virus (HIV); Men who have sex with men; Medicine; Phylogenetic tree; Family medicine; Demography; Virology; Biology; Genetics; Sociology","routes":{"ca_aff":true,"ca_fund":false,"ca_venue":false,"about_ca":false,"invisible_to_affiliation_only":false},"retraction":null,"screen":null,"direct_labels":[],"prediction":{"model_version":"metacan-v3-hybrid-931329e0061c","candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0004013916,0.0001912193,0.0001787447,0.001243168,0.002810386,0.0009871338,0.0004228476,0.0005229372,0.006728982],"category_scores_gemma":[0.002390551,0.000260482,0.0002090072,0.001831406,0.000694229,0.0006506528,0.001137114,0.0007403857,0.0003791745],"about_ca_system_candidate":false,"about_ca_system_consensus":false,"about_ca_system_score_codex":0.0006691301,"about_ca_system_score_gemma":0.001259137,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_topic_score_codex":0.08816393,"about_ca_topic_score_gemma":0.1496915,"domain_scores_codex":[0.9996855,0.00009995861,0.00001345893,0.0000480962,0.00002471824,0.0001283413],"domain_scores_gemma":[0.9991426,0.000170387,0.000341226,0.00003231045,0.0001240444,0.0001893826],"domain_codex":null,"domain_gemma":null,"domain_candidate":null,"domain_consensus":null,"study_design_codex":"observational","study_design_gemma":"observational","study_design_scores_codex":[0.000286847,0.00006035861,0.9842949,0.00004838083,0.00003586311,0.00019632,0.003214227,0.0001723428,0.0007705204,0.0006402415,0.001263677,0.009016273],"study_design_scores_gemma":[0.000008664193,0.00003723441,0.9846216,0.00005901914,0.00002302686,0.0001779734,0.01350377,0.0004325048,0.0001067206,0.0003610348,0.0006615882,0.000006933556],"study_design_candidate":"observational","study_design_consensus":"observational","genre_codex":"empirical","genre_gemma":"empirical","genre_scores_codex":[0.997895,0.0002213375,0.00009105002,0.0002709586,0.000007287033,0.00001336755,0.0003813856,0.000002583802,0.001117131],"genre_scores_gemma":[0.9988204,0.0001698462,0.0002773477,0.00004564932,0.00000639211,0.000007552829,0.000245678,0.000002690618,0.0004243533],"genre_candidate":"empirical","genre_consensus":"empirical","teacher_disagreement_score":0.08816393,"threshold_uncertainty_score":0.1753016,"prediction_status":"machine_predicted_unvalidated"},"machine_scores":{"provisional":true,"baseline":true,"maturity_gate_passed":false,"score_opus":0.04866018017182097,"score_gpt":0.3828771037504099,"score_spread":0.3342169235785889,"validation_status":"score_only:v0-immature-baseline","note":"Baseline scores from an immature model (maturity gate not passed). Scores rank; they never assert a category."}}