{"id":"W4401483981","doi":"10.1038/s41598-024-69421-4","title":"Evolution and related pathogenic genes of Pseudodiploöspora longispora on Morchella based on genomic characterization and comparative genomic analysis","year":2024,"lang":"en","type":"article","venue":"Scientific Reports","topic":"Fungal Biology and Applications","field":"Medicine","cited_by":8,"is_retracted":false,"has_abstract":true,"ca_institutions":"Ministry of Education and Child Care","funders":"National Natural Science Foundation of China","keywords":"Gene; Biology; Genetics; Computational biology; Genome","routes":{"ca_aff":true,"ca_fund":false,"ca_venue":false,"about_ca":false,"invisible_to_affiliation_only":false},"retraction":null,"screen":null,"direct_labels":[],"prediction":{"model_version":"codex-gemma-dda1882f352a","candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0005891254,0.0001214113,0.000274114,0.0004878312,0.0001372933,0.00004053554,0.00002872038,0.00009873948,0.00005696396],"category_scores_gemma":[0.00001996554,0.0001003549,0.00008794869,0.0008279607,0.0002831777,0.00004118009,0.00001814824,0.0001126353,0.00001671708],"about_ca_system_candidate":false,"about_ca_system_consensus":false,"about_ca_system_score_codex":0.00005911052,"about_ca_system_score_gemma":0.0001377352,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_topic_score_codex":0.000006499107,"about_ca_topic_score_gemma":0.000002833495,"domain_scores_codex":[0.99866,0.00004524438,0.0003939945,0.0006311003,0.0001489224,0.0001207907],"domain_scores_gemma":[0.9992038,0.00005019137,0.000182905,0.00040347,0.00007994253,0.00007967289],"domain_codex":null,"domain_gemma":null,"domain_candidate":null,"domain_consensus":null,"study_design_codex":"bench_or_experimental","study_design_gemma":"observational","study_design_scores_codex":[0.00005603898,0.00007199088,0.04108298,0.00005047566,0.0001455695,0.00007384828,0.0002173269,0.0004506424,0.9566913,0.0005791399,0.00005369,0.0005270116],"study_design_scores_gemma":[0.0002315578,0.0002049114,0.9081176,0.0001126287,0.0009066883,0.000141878,0.00006978148,0.05935487,0.02910798,0.0007180796,0.0008587918,0.0001752496],"study_design_candidate":"bench_or_experimental","study_design_consensus":null,"genre_codex":"empirical","genre_gemma":"empirical","genre_scores_codex":[0.9975581,0.0007185503,0.000397947,0.0001980899,0.0004110525,0.0003737107,0.0000326209,0.00004683521,0.0002631315],"genre_scores_gemma":[0.9978188,0.00002469161,0.0001261845,0.00002065209,0.00002395599,0.00001679704,0.0008300011,0.000007502832,0.001131473],"genre_candidate":"empirical","genre_consensus":"empirical","teacher_disagreement_score":0.9275833,"threshold_uncertainty_score":0.4092355,"prediction_status":"machine_predicted_unvalidated"},"machine_scores":{"provisional":true,"baseline":true,"maturity_gate_passed":false,"score_opus":0.02048316890103874,"score_gpt":0.2702616034423322,"score_spread":0.2497784345412934,"validation_status":"score_only:v0-immature-baseline","note":"Baseline scores from an immature model (maturity gate not passed). Scores rank; they never assert a category."}}