{"id":"W4401493765","doi":"10.1007/s00122-024-04708-8","title":"Genetic diversity and genome-wide association study of partial resistance to Sclerotinia stem rot in a Canadian soybean germplasm panel","year":2024,"lang":"en","type":"article","venue":"Theoretical and Applied Genetics","topic":"Plant pathogens and resistance mechanisms","field":"Agricultural and Biological Sciences","cited_by":2,"is_retracted":false,"has_abstract":false,"ca_institutions":"University of Guelph","funders":"Agriculture and Agri-Food Canada; Grain Farmers of Ontario","keywords":"Biology; Sclerotinia; Sclerotinia sclerotiorum; Germplasm; Genetic diversity; Plant disease resistance; Association mapping; Genome-wide association study; Stem rot; Genetics; Cultivar; Biotechnology; Genotype; Single-nucleotide polymorphism; Agronomy; Horticulture; Gene; Population","routes":{"ca_aff":true,"ca_fund":true,"ca_venue":false,"about_ca":true,"invisible_to_affiliation_only":false},"retraction":null,"screen":null,"direct_labels":[],"prediction":{"model_version":"metacan-v3-hybrid-931329e0061c","candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0007898554,0.0004626016,0.0003798842,0.002615886,0.001759654,0.0005836544,0.0007552336,0.0003360063,0.001319777],"category_scores_gemma":[0.0006975344,0.0002391365,0.0005593451,0.003502954,0.0006983544,0.0001164417,0.0006116023,0.0006023719,0.0001060776],"about_ca_system_candidate":false,"about_ca_system_consensus":false,"about_ca_system_score_codex":0.005327359,"about_ca_system_score_gemma":0.005589003,"about_ca_topic_candidate":true,"about_ca_topic_consensus":true,"about_ca_topic_score_codex":0.9113274,"about_ca_topic_score_gemma":0.956087,"domain_scores_codex":[0.9991955,0.00009364835,0.00003653976,0.0002888881,0.0001914696,0.0001940159],"domain_scores_gemma":[0.9992869,0.00009099564,0.0001043843,0.00004242884,0.0002465522,0.0002287645],"domain_codex":null,"domain_gemma":null,"domain_candidate":null,"domain_consensus":null,"study_design_codex":"observational","study_design_gemma":"observational","study_design_scores_codex":[0.0008637371,0.0001240959,0.937937,0.00003771408,0.0006387895,0.0005305894,0.002477422,0.0004733047,0.0467315,0.0003994645,0.0007311524,0.009055323],"study_design_scores_gemma":[0.00001185894,0.00002563525,0.9985176,0.000004469503,0.00007474272,0.00008598233,0.0003222184,0.0001674201,0.0002225565,0.00001520719,0.0005455316,0.000006786227],"study_design_candidate":"observational","study_design_consensus":"observational","genre_codex":"empirical","genre_gemma":"empirical","genre_scores_codex":[0.9983071,0.00009008928,0.0001322656,0.00004577142,0.000002273121,0.00001214868,0.0009414927,0.000005355982,0.0004634421],"genre_scores_gemma":[0.9981622,0.00008620942,0.0002741264,0.00002915232,0.000001668347,0.000007786407,0.000869802,0.000005351728,0.0005636833],"genre_candidate":"empirical","genre_consensus":"empirical","teacher_disagreement_score":0.08867264,"threshold_uncertainty_score":0.1783897,"prediction_status":"machine_predicted_unvalidated"},"machine_scores":{"provisional":true,"baseline":true,"maturity_gate_passed":false,"score_opus":0.01530308510895746,"score_gpt":0.1877825039869274,"score_spread":0.17247941887797,"validation_status":"score_only:v0-immature-baseline","note":"Baseline scores from an immature model (maturity gate not passed). Scores rank; they never assert a category."}}