{"id":"W4401580736","doi":"10.3390/bacteria3030016","title":"The Emergence of the Slc11 Clade MCbgut: A Parsimonious Hypothesis for the Dawn of Lactobacillales in the Gut of Early Vertebrates","year":2024,"lang":"en","type":"article","venue":"Bacteria","topic":"Gut microbiota and health","field":"Biochemistry, Genetics and Molecular Biology","cited_by":0,"is_retracted":false,"has_abstract":true,"ca_institutions":"Institut National de la Recherche Scientifique","funders":"","keywords":"Clade; Biology; Zoology; Evolutionary biology; Environmental ethics; Phylogenetics; Philosophy; Genetics; Gene","routes":{"ca_aff":true,"ca_fund":false,"ca_venue":false,"about_ca":false,"invisible_to_affiliation_only":false},"retraction":null,"screen":null,"direct_labels":[],"prediction":{"model_version":"metacan-v3-hybrid-931329e0061c","candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0002625918,0.0003086645,0.0003659396,0.0004530911,0.0007703805,0.00108683,0.0003851066,0.001076856,0.001167654],"category_scores_gemma":[0.0003503905,0.0002039156,0.0003209582,0.0003385549,0.0006872722,0.001005869,0.000749409,0.0007444861,0.000523756],"about_ca_system_candidate":false,"about_ca_system_consensus":false,"about_ca_system_score_codex":0.0004191178,"about_ca_system_score_gemma":0.000414373,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_topic_score_codex":0.001139805,"about_ca_topic_score_gemma":0.00150318,"domain_scores_codex":[0.9998271,0.00002261155,0.000007786744,0.0000658692,0.00002574955,0.00005095554],"domain_scores_gemma":[0.9998314,0.00001548471,0.00002978474,0.00001940943,0.00002605158,0.00007775325],"domain_codex":null,"domain_gemma":null,"domain_candidate":null,"domain_consensus":null,"study_design_codex":"bench_or_experimental","study_design_gemma":"theoretical_or_conceptual","study_design_scores_codex":[0.001177107,0.00006452433,0.07451217,0.0003257484,0.000063563,0.004175429,0.001556486,0.0007450598,0.8555443,0.02240772,0.00100588,0.03842202],"study_design_scores_gemma":[0.0001275211,0.002153677,0.5755558,0.0006346198,0.000225998,0.01451321,0.006268603,0.02288362,0.2243867,0.02437713,0.1285163,0.0003569299],"study_design_candidate":"theoretical_or_conceptual","study_design_consensus":null,"genre_codex":"empirical","genre_gemma":"empirical","genre_scores_codex":[0.9801469,0.00353208,0.009199433,0.00116611,0.0001128769,0.00002871802,0.0002460022,0.0001889686,0.005378834],"genre_scores_gemma":[0.9897474,0.001034696,0.005942222,0.0003728853,0.00004957434,0.00002100632,0.0003753389,0.00003201645,0.002424865],"genre_candidate":"empirical","genre_consensus":"empirical","teacher_disagreement_score":0.001167654,"threshold_uncertainty_score":0.00390619,"prediction_status":"machine_predicted_unvalidated"},"machine_scores":{"provisional":true,"baseline":true,"maturity_gate_passed":false,"score_opus":0.01905749877734931,"score_gpt":0.2654144359522094,"score_spread":0.2463569371748601,"validation_status":"score_only:v0-immature-baseline","note":"Baseline scores from an immature model (maturity gate not passed). Scores rank; they never assert a category."}}