{"id":"W4401595761","doi":"10.1093/aob/mcae110","title":"A possible case of adaptive radiation in cycads. A commentary on ‘Transcriptome sequencing data provide a solid base to understand the phylogenetic relationships, biogeography and reticulated evolution of the genus <i>Zamia</i> L. (Cycadales: Zamiaceae)’","year":2024,"lang":"en","type":"letter","venue":"Annals of Botany","topic":"Botany and Geology in Latin America and Caribbean","field":"Agricultural and Biological Sciences","cited_by":0,"is_retracted":false,"has_abstract":true,"ca_institutions":"Université Laval","funders":"","keywords":"Biology; Phylogenetic tree; Adaptive radiation; Biogeography; Evolutionary biology; Genus; Transcriptome; Phylogenetics; Adaptive evolution; Ecology; Genetics; Gene","routes":{"ca_aff":true,"ca_fund":false,"ca_venue":false,"about_ca":false,"invisible_to_affiliation_only":false},"retraction":null,"screen":null,"direct_labels":[],"prediction":{"model_version":"codex-gemma-dda1882f352a","candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0006738952,0.000236432,0.0003860956,0.00007484683,0.0001866541,0.0000212861,0.0004143391,0.0003361072,0.00001282852],"category_scores_gemma":[0.00008537652,0.00009534867,0.0001523434,0.001072017,0.0005625025,0.00007773991,0.0001492466,0.0007260566,7.457447e-7],"about_ca_system_candidate":false,"about_ca_system_consensus":false,"about_ca_system_score_codex":0.00003839929,"about_ca_system_score_gemma":0.00004597302,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_topic_score_codex":0.002722295,"about_ca_topic_score_gemma":0.001598407,"domain_scores_codex":[0.9978602,0.0005969562,0.0005530777,0.0004462352,0.0002719281,0.0002716266],"domain_scores_gemma":[0.9985712,0.0005710284,0.0003802548,0.0003365017,0.00009648009,0.00004458376],"domain_codex":null,"domain_gemma":null,"domain_candidate":null,"domain_consensus":null,"study_design_codex":"not_applicable","study_design_gemma":"observational","study_design_scores_codex":[0.001393449,0.0006210426,0.05137603,0.001160414,0.001860366,0.0009943068,0.01162889,0.0007720613,0.1388335,0.001112252,0.7567118,0.03353582],"study_design_scores_gemma":[0.004998641,0.02070947,0.5578625,0.02045554,0.005914378,0.002489229,0.1097239,0.02901474,0.03399147,0.08113445,0.1264766,0.00722908],"study_design_candidate":"not_applicable","study_design_consensus":null,"genre_codex":"empirical","genre_gemma":"empirical","genre_scores_codex":[0.7699739,0.003699014,0.00001113205,0.2237059,0.0001084856,0.0008209986,0.001599435,0.0000112033,0.00006992934],"genre_scores_gemma":[0.9628787,0.0002525865,0.00003130843,0.03656263,0.0001390007,0.00001569198,0.00009584294,0.000003669938,0.00002055895],"genre_candidate":"empirical","genre_consensus":"empirical","teacher_disagreement_score":0.6302352,"threshold_uncertainty_score":0.4115315,"prediction_status":"machine_predicted_unvalidated"},"machine_scores":{"provisional":true,"baseline":true,"maturity_gate_passed":false,"score_opus":0.0640530479585015,"score_gpt":0.2709426252642415,"score_spread":0.20688957730574,"validation_status":"score_only:v0-immature-baseline","note":"Baseline scores from an immature model (maturity gate not passed). Scores rank; they never assert a category."}}