{"id":"W4401618221","doi":"10.1080/22221751.2024.2392667","title":"Descriptive epidemiology and phylogenetic analysis of highly pathogenic avian influenza H5N1 clade 2.3.4.4b in British Columbia (B.C.) and the Yukon, Canada, September 2022 to June 2023","year":2024,"lang":"en","type":"article","venue":"Emerging Microbes & Infections","topic":"Influenza Virus Research Studies","field":"Medicine","cited_by":11,"is_retracted":false,"has_abstract":true,"ca_institutions":"Yukon Department of Environment; Ministry of Agriculture; Public Health Agency of Canada; Canadian Wildlife Federation; Canadian Food Inspection Agency; Environment and Climate Change Canada; Government of British Columbia; BC Centre for Disease Control; University of British Columbia","funders":"British Columbia Centre for Disease Control","keywords":"Clade; Influenza A virus subtype H5N1; Highly pathogenic; Phylogenetic tree; Epidemiology; Avian influenza virus; Virology; Phylogenetics; Biology; Geography; Medicine; Virus; Genetics; Gene; Internal medicine","routes":{"ca_aff":true,"ca_fund":true,"ca_venue":false,"about_ca":true,"invisible_to_affiliation_only":false},"retraction":null,"screen":null,"direct_labels":[],"prediction":{"model_version":"metacan-v3-hybrid-931329e0061c","candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0002302506,0.0002308124,0.0001971766,0.002115443,0.0008945863,0.0005509006,0.0004870073,0.0002838206,0.0008105101],"category_scores_gemma":[0.0006548607,0.0002177484,0.0001823146,0.003345785,0.0003597673,0.0001455158,0.0003410958,0.0002928519,0.0001356486],"about_ca_system_candidate":false,"about_ca_system_consensus":false,"about_ca_system_score_codex":0.003680858,"about_ca_system_score_gemma":0.003830329,"about_ca_topic_candidate":true,"about_ca_topic_consensus":true,"about_ca_topic_score_codex":0.9079392,"about_ca_topic_score_gemma":0.9500772,"domain_scores_codex":[0.9996216,0.00002942771,0.00003131136,0.00006870147,0.0001177188,0.0001311056],"domain_scores_gemma":[0.9988543,0.00006836571,0.0003291122,0.00003080344,0.0004525336,0.0002649853],"domain_codex":null,"domain_gemma":null,"domain_candidate":null,"domain_consensus":null,"study_design_codex":"observational","study_design_gemma":"observational","study_design_scores_codex":[0.00004541205,0.00001257661,0.9968188,0.00001348314,0.00001513749,0.0001054575,0.0002477659,0.00006064975,0.0007092274,0.00001176072,0.0003436613,0.001616066],"study_design_scores_gemma":[4.343681e-7,0.000007938658,0.9995315,0.000002811927,0.000001751435,0.0000404578,0.0002415239,0.00003326026,0.00002011063,0.000001135692,0.0001181281,0.000001050463],"study_design_candidate":"observational","study_design_consensus":"observational","genre_codex":"empirical","genre_gemma":"empirical","genre_scores_codex":[0.995474,0.0001706102,0.00006858613,0.00003008788,0.000002667664,0.00002513318,0.003505273,0.00000422799,0.0007193546],"genre_scores_gemma":[0.9957141,0.0002066438,0.0001714183,0.00002319638,0.000002478418,0.00002148865,0.003287811,0.000002041886,0.0005706892],"genre_candidate":"empirical","genre_consensus":"empirical","teacher_disagreement_score":0.0920608,"threshold_uncertainty_score":0.1852059,"prediction_status":"machine_predicted_unvalidated"},"machine_scores":{"provisional":true,"baseline":true,"maturity_gate_passed":false,"score_opus":0.02664464466816478,"score_gpt":0.3203686725225761,"score_spread":0.2937240278544113,"validation_status":"score_only:v0-immature-baseline","note":"Baseline scores from an immature model (maturity gate not passed). Scores rank; they never assert a category."}}