{"id":"W4401715405","doi":"10.1039/d4mo00108g","title":"Sequencing, assembly, and genomic annotation of <i>Leucoagaricus gongylophorus</i> LEU18496, a dikarya mutualistic species","year":2024,"lang":"en","type":"article","venue":"Molecular Omics","topic":"Mycorrhizal Fungi and Plant Interactions","field":"Agricultural and Biological Sciences","cited_by":4,"is_retracted":false,"has_abstract":true,"ca_institutions":"University of New Brunswick","funders":"Consejo Nacional de Ciencia y Tecnología","keywords":"Annotation; Fungus; Biology; Computational biology; Evolutionary biology; Genetics; Botany","routes":{"ca_aff":true,"ca_fund":false,"ca_venue":false,"about_ca":false,"invisible_to_affiliation_only":false},"retraction":null,"screen":null,"direct_labels":[],"prediction":{"model_version":"codex-gemma-dda1882f352a","candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00009764517,0.0001150698,0.000136903,0.00002473119,0.00006595658,0.00009744039,0.00009657969,0.00006840509,0.0002607519],"category_scores_gemma":[0.00005856713,0.00005390643,0.00007272724,0.0001862295,0.00001378945,0.00007697664,0.00004488828,0.0001106441,0.00008836604],"about_ca_system_candidate":false,"about_ca_system_consensus":false,"about_ca_system_score_codex":0.00003948049,"about_ca_system_score_gemma":0.00001678271,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_topic_score_codex":0.0005313957,"about_ca_topic_score_gemma":0.00008726599,"domain_scores_codex":[0.9992957,0.0000385495,0.0001908169,0.0002163814,0.0001069571,0.0001515663],"domain_scores_gemma":[0.9994161,0.000403934,0.00004477454,0.00004653768,0.00003436683,0.00005429993],"domain_codex":null,"domain_gemma":null,"domain_candidate":null,"domain_consensus":null,"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","study_design_scores_codex":[0.00001152831,0.00001051546,0.0006433367,0.0000235266,0.00002032885,0.00004812943,0.0001035324,0.00003682639,0.9862734,0.007657079,0.001323327,0.003848446],"study_design_scores_gemma":[0.0001630032,0.0007649388,0.01451291,0.000416589,0.0003026191,0.000679873,0.001337616,0.01850772,0.4818023,0.01036403,0.4700322,0.00111619],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","genre_codex":"empirical","genre_gemma":"empirical","genre_scores_codex":[0.9923906,0.001683475,0.0001817131,0.0002825428,0.0002726171,0.00015209,0.0007425906,0.00005253534,0.004241885],"genre_scores_gemma":[0.9978247,0.0008591777,0.0001533207,0.0001710424,0.00009316218,0.000008373751,0.0005791049,0.000001948188,0.0003091658],"genre_candidate":"empirical","genre_consensus":"empirical","teacher_disagreement_score":0.5044712,"threshold_uncertainty_score":0.2855051,"prediction_status":"machine_predicted_unvalidated"},"machine_scores":{"provisional":true,"baseline":true,"maturity_gate_passed":false,"score_opus":0.01240696215031706,"score_gpt":0.2037101894131449,"score_spread":0.1913032272628279,"validation_status":"score_only:v0-immature-baseline","note":"Baseline scores from an immature model (maturity gate not passed). Scores rank; they never assert a category."}}