{"id":"W4401768830","doi":"10.1111/his.15304","title":"TFE3‐rearranged nonmelanotic renal PEComa: a case series expanding their phenotypic and fusion landscape","year":2024,"lang":"en","type":"article","venue":"Histopathology","topic":"Tuberous Sclerosis Complex Research","field":"Medicine","cited_by":18,"is_retracted":false,"has_abstract":true,"ca_institutions":"Calgary Laboratory Services; University of Calgary","funders":"","keywords":"TFE3; Biology; Fluorescence in situ hybridization; Pathology; Tuberous sclerosis; Immunohistochemistry; PAX8; Gene rearrangement; Fusion gene; Medicine; Genetics; Gene; Gene expression","routes":{"ca_aff":true,"ca_fund":false,"ca_venue":false,"about_ca":false,"invisible_to_affiliation_only":false},"retraction":null,"screen":null,"direct_labels":[],"prediction":{"model_version":"codex-gemma-dda1882f352a","candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0003602676,0.0001829119,0.0003466742,0.0002894219,0.0002081314,0.00004237166,0.00006704134,0.0001281772,0.0005594486],"category_scores_gemma":[0.0001017809,0.0001447371,0.00006205693,0.0002549681,0.0002370213,0.00009053463,0.0001362857,0.0003944311,0.0001197047],"about_ca_system_candidate":false,"about_ca_system_consensus":false,"about_ca_system_score_codex":0.0001047986,"about_ca_system_score_gemma":0.00008480969,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_topic_score_codex":0.00003376107,"about_ca_topic_score_gemma":0.0001538062,"domain_scores_codex":[0.9986471,0.0001411292,0.0002246302,0.0004475837,0.0001543696,0.0003851649],"domain_scores_gemma":[0.9993045,0.0001459499,0.00002665644,0.0003137817,0.000054173,0.0001549443],"domain_codex":null,"domain_gemma":null,"domain_candidate":null,"domain_consensus":null,"study_design_codex":"bench_or_experimental","study_design_gemma":"case_report","study_design_scores_codex":[0.0009950313,0.0002305678,0.04078646,0.0009866721,0.00004237268,0.09615731,0.01531346,0.000003599815,0.8016599,0.002527343,0.009161548,0.03213571],"study_design_scores_gemma":[0.004376667,0.002846816,0.3054859,0.0008218712,0.0003430653,0.6297479,0.002801241,0.00302251,0.003029008,0.001329312,0.04534707,0.0008485707],"study_design_candidate":"bench_or_experimental","study_design_consensus":null,"genre_codex":"empirical","genre_gemma":"empirical","genre_scores_codex":[0.9875985,0.006536748,0.0002625123,0.001638714,0.0003450591,0.0002674785,0.00001606906,0.000210379,0.003124479],"genre_scores_gemma":[0.9962422,0.0001343957,0.0007200871,0.0001269711,0.0002657,0.00003976629,0.00002480137,0.0000427187,0.002403325],"genre_candidate":"empirical","genre_consensus":"empirical","teacher_disagreement_score":0.7986309,"threshold_uncertainty_score":0.6125569,"prediction_status":"machine_predicted_unvalidated"},"machine_scores":{"provisional":true,"baseline":true,"maturity_gate_passed":false,"score_opus":0.03382764916513417,"score_gpt":0.2865068964206711,"score_spread":0.2526792472555369,"validation_status":"score_only:v0-immature-baseline","note":"Baseline scores from an immature model (maturity gate not passed). Scores rank; they never assert a category."}}