{"id":"W4401903524","doi":"10.17504/protocols.io.5qpvok9j7l4o/v1","title":"Mitochondrial Antigen Presentation (MitAP) to 2CZ CD8+ T cell hybridoma v1","year":2024,"lang":"en","type":"preprint","venue":"","topic":"Cancer Immunotherapy and Biomarkers","field":"Medicine","cited_by":0,"is_retracted":false,"has_abstract":true,"ca_institutions":"McGill University; McGill University Health Centre","funders":"","keywords":"Presentation (obstetrics); Antigen; Antigen presentation; CD8; Mitochondrion; T cell; Chemistry; Molecular biology; Biology; Cell biology; Immunology; Medicine; Immune system","routes":{"ca_aff":true,"ca_fund":false,"ca_venue":false,"about_ca":false,"invisible_to_affiliation_only":false},"retraction":null,"screen":null,"direct_labels":[],"prediction":{"model_version":"metacan-v3-hybrid-931329e0061c","candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0008426592,0.001493805,0.000766016,0.001097535,0.0006678648,0.0009879114,0.001176894,0.001212294,0.03081391],"category_scores_gemma":[0.000570028,0.0006997638,0.0006320092,0.0006227873,0.0003306526,0.0005215883,0.0009987596,0.003402768,0.02197901],"about_ca_system_candidate":false,"about_ca_system_consensus":false,"about_ca_system_score_codex":0.0004555592,"about_ca_system_score_gemma":0.0004455776,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_topic_score_codex":0.0003833632,"about_ca_topic_score_gemma":0.0006452418,"domain_scores_codex":[0.9988462,0.0002122295,0.00009174742,0.0002790741,0.0003441091,0.0002265881],"domain_scores_gemma":[0.9995933,0.0001130439,0.0000310731,0.0001205169,0.00007756397,0.00006447221],"domain_codex":null,"domain_gemma":null,"domain_candidate":null,"domain_consensus":null,"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","study_design_scores_codex":[0.0004611988,0.0001618673,0.0001859372,0.0003491481,0.0000294124,0.0001178938,0.0001020881,0.000285314,0.9760513,0.002015007,0.008776731,0.01146405],"study_design_scores_gemma":[0.0001449768,0.0003051883,0.001115331,0.00004447288,0.00004317137,0.0004717113,0.00003041746,0.001781919,0.892199,0.0007757366,0.1030581,0.00002992105],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","genre_codex":"methods","genre_gemma":"empirical","genre_scores_codex":[0.2436774,0.005500677,0.6032999,0.001912039,0.00244,0.01027253,0.05679738,0.01531399,0.06078599],"genre_scores_gemma":[0.3705421,0.004920194,0.3262334,0.001208716,0.0006339128,0.01648378,0.1235069,0.004374947,0.1520961],"genre_candidate":"empirical","genre_consensus":null,"teacher_disagreement_score":0.03081391,"threshold_uncertainty_score":0.1030828,"prediction_status":"machine_predicted_unvalidated"},"machine_scores":{"provisional":true,"baseline":true,"maturity_gate_passed":false,"score_opus":0.01998504811355882,"score_gpt":0.3065861316364977,"score_spread":0.2866010835229388,"validation_status":"score_only:v0-immature-baseline","note":"Baseline scores from an immature model (maturity gate not passed). Scores rank; they never assert a category."}}