{"id":"W4402072811","doi":"10.5376/mpb.2024.15.0016","title":"Advances in Sugarcane Genomics: Navigating Through Complex Polyploid Genomes","year":2024,"lang":"en","type":"article","venue":"Molecular Plant Breeding","topic":"Sugarcane Cultivation and Processing","field":"Agricultural and Biological Sciences","cited_by":2,"is_retracted":false,"has_abstract":true,"ca_institutions":"","funders":"National Key Research and Development Program of China; Natural Science Foundation of Guangxi Province","keywords":"Biology; Polyploid; Genomics; Genome; Genetics; Functional genomics; Computational biology; Evolutionary biology; Biotechnology; Gene","routes":{"ca_aff":false,"ca_fund":false,"ca_venue":true,"about_ca":false,"invisible_to_affiliation_only":true},"retraction":null,"screen":null,"direct_labels":[],"prediction":{"model_version":"codex-gemma-dda1882f352a","candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0001815271,0.0001534395,0.0001598818,0.0000181354,0.0001463141,0.0002027305,0.0001831442,0.00006221116,0.0003020536],"category_scores_gemma":[0.00002668509,0.00007242037,0.00006168144,0.000439151,0.00003807952,0.0003049869,0.00005867255,0.0002162488,0.00002393542],"about_ca_system_candidate":false,"about_ca_system_consensus":false,"about_ca_system_score_codex":0.00006180548,"about_ca_system_score_gemma":0.00001425437,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_topic_score_codex":0.0001675075,"about_ca_topic_score_gemma":0.0001852476,"domain_scores_codex":[0.9988794,0.00003667803,0.0002423745,0.0003373447,0.0001861046,0.0003180524],"domain_scores_gemma":[0.9997084,0.0001409349,0.00004577048,0.00003151872,0.00002071453,0.00005264832],"domain_codex":null,"domain_gemma":null,"domain_candidate":null,"domain_consensus":null,"study_design_codex":"bench_or_experimental","study_design_gemma":"not_applicable","study_design_scores_codex":[0.000007295171,0.000009237428,0.001282189,0.00003445746,0.000005289765,0.00006120986,0.0005364641,0.00004899623,0.8292589,0.0009052971,0.00005460134,0.1677961],"study_design_scores_gemma":[0.0006483829,0.0003819082,0.01302587,0.002394783,0.00004214001,0.0005643676,0.008666173,0.02062023,0.2587731,0.008785236,0.684207,0.001890848],"study_design_candidate":"bench_or_experimental","study_design_consensus":null,"genre_codex":"empirical","genre_gemma":"empirical","genre_scores_codex":[0.9811136,0.01159023,0.00009709196,0.001441109,0.0001674312,0.0001245125,0.00005072619,0.000160087,0.005255178],"genre_scores_gemma":[0.9980925,0.0004903143,0.0005690085,0.0003804129,0.0002003552,0.00001042517,0.0002147218,0.000002857018,0.00003943161],"genre_candidate":"empirical","genre_consensus":"empirical","teacher_disagreement_score":0.6841524,"threshold_uncertainty_score":0.3307275,"prediction_status":"machine_predicted_unvalidated"},"machine_scores":{"provisional":true,"baseline":true,"maturity_gate_passed":false,"score_opus":0.03960590401075219,"score_gpt":0.2679654701176383,"score_spread":0.2283595661068861,"validation_status":"score_only:v0-immature-baseline","note":"Baseline scores from an immature model (maturity gate not passed). Scores rank; they never assert a category."}}