{"id":"W4402439533","doi":"10.1111/tpj.17018","title":"<scp>ERFVII</scp>‐controlled hypoxia responses are in part facilitated by <scp>MEDIATOR SUBUNIT</scp> 25 in <i>Arabidopsis thaliana</i>","year":2024,"lang":"en","type":"article","venue":"The Plant Journal","topic":"Plant responses to water stress","field":"Agricultural and Biological Sciences","cited_by":21,"is_retracted":false,"has_abstract":true,"ca_institutions":"","funders":"Genome Center, University of California, Davis; University of California, Davis; Vlaamse regering; Peking University; School of Biosciences, University of Nottingham; Fonds Wetenschappelijk Onderzoek; Chinese Academy of Sciences; Institute of Genetics and Developmental Biology, Chinese Academy of Sciences; Deutsche Forschungsgemeinschaft; Institute of Genetics; University of Oxford","keywords":"Mediator; Cell biology; Biology; Transcription factor; RNA polymerase II; Protein subunit; Gene expression; Gene; Biochemistry; Promoter","routes":{"ca_aff":false,"ca_fund":true,"ca_venue":false,"about_ca":false,"invisible_to_affiliation_only":true},"retraction":null,"screen":null,"direct_labels":[],"prediction":{"model_version":"codex-gemma-dda1882f352a","candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.002291076,0.0004168987,0.0006632282,0.0001622323,0.0002932752,0.0005330066,0.0009101058,0.0002328274,0.00008278881],"category_scores_gemma":[0.001563299,0.0001463302,0.0002393715,0.0008611082,0.0001332645,0.0003123381,0.000124938,0.001101277,0.0002099785],"about_ca_system_candidate":false,"about_ca_system_consensus":false,"about_ca_system_score_codex":0.0001155856,"about_ca_system_score_gemma":0.00007493455,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_topic_score_codex":0.0003607701,"about_ca_topic_score_gemma":0.003768547,"domain_scores_codex":[0.995629,0.001465108,0.0008056053,0.0004603537,0.0006397695,0.001000136],"domain_scores_gemma":[0.9907188,0.008546513,0.0002416541,0.0001332315,0.00005894058,0.0003008071],"domain_codex":null,"domain_gemma":null,"domain_candidate":null,"domain_consensus":null,"study_design_codex":"not_applicable","study_design_gemma":"not_applicable","study_design_scores_codex":[0.001673814,0.0005885445,0.09662665,0.00007351441,0.0004052077,0.007143576,0.004027073,0.0001913314,0.3547877,0.00006642886,0.5273902,0.007025944],"study_design_scores_gemma":[0.003398256,0.0005916586,0.2618622,0.0009937907,0.0001275472,0.003172661,0.007234863,0.0009436507,0.01417489,0.0008005815,0.7063844,0.0003155255],"study_design_candidate":"not_applicable","study_design_consensus":"not_applicable","genre_codex":"empirical","genre_gemma":"empirical","genre_scores_codex":[0.9878266,0.005049085,9.172875e-7,0.002460135,0.0005894687,0.0003983553,0.002936075,0.0001052807,0.0006340136],"genre_scores_gemma":[0.9883927,0.001534974,0.000007432818,0.000336029,0.0004155536,0.00005442866,0.0001876569,0.000005668559,0.009065557],"genre_candidate":"empirical","genre_consensus":"empirical","teacher_disagreement_score":0.3406129,"threshold_uncertainty_score":0.5967172,"prediction_status":"machine_predicted_unvalidated"},"machine_scores":{"provisional":true,"baseline":true,"maturity_gate_passed":false,"score_opus":0.0233031882390659,"score_gpt":0.214196848947222,"score_spread":0.1908936607081561,"validation_status":"score_only:v0-immature-baseline","note":"Baseline scores from an immature model (maturity gate not passed). Scores rank; they never assert a category."}}