{"id":"W4402462984","doi":"10.1101/2024.09.10.612304","title":"The world’s largest High Arctic lake is dominated by uncharacterized, genetically highly diverse phages","year":2024,"lang":"en","type":"preprint","venue":"bioRxiv (Cold Spring Harbor Laboratory)","topic":"Genomics and Phylogenetic Studies","field":"Biochemistry, Genetics and Molecular Biology","cited_by":1,"is_retracted":false,"has_abstract":true,"ca_institutions":"University of Ottawa","funders":"Natural Sciences and Engineering Research Council of Canada","keywords":"Arctic; Genetically engineered; The arctic; Biology; Computational biology; Genetics; Gene; Ecology; Geology; Oceanography","routes":{"ca_aff":true,"ca_fund":true,"ca_venue":false,"about_ca":false,"invisible_to_affiliation_only":false},"retraction":null,"screen":null,"direct_labels":[],"prediction":{"model_version":"metacan-v3-hybrid-931329e0061c","candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0002544779,0.0002556011,0.0003154537,0.0005009476,0.001364923,0.0008799981,0.0001699285,0.0003265475,0.001074451],"category_scores_gemma":[0.0003066144,0.0001670707,0.0002592032,0.0008188745,0.0004598651,0.0004180659,0.0006452592,0.0004712462,0.0002733735],"about_ca_system_candidate":false,"about_ca_system_consensus":false,"about_ca_system_score_codex":0.0004758856,"about_ca_system_score_gemma":0.000746619,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_topic_score_codex":0.01397732,"about_ca_topic_score_gemma":0.02152822,"domain_scores_codex":[0.9997619,0.00001501128,0.000007695201,0.00008970749,0.00006592713,0.00005976947],"domain_scores_gemma":[0.9998542,0.00002186596,0.00003999566,0.00001288126,0.00003675115,0.00003426872],"domain_codex":null,"domain_gemma":null,"domain_candidate":null,"domain_consensus":null,"study_design_codex":"bench_or_experimental","study_design_gemma":"observational","study_design_scores_codex":[0.0004154763,0.00005164803,0.1409309,0.0001445677,0.00007844009,0.0001866068,0.001118275,0.0009588421,0.8421705,0.0007392298,0.0002367143,0.01296886],"study_design_scores_gemma":[0.00002474622,0.0003764565,0.8185463,0.00005724584,0.0001165949,0.0008891333,0.00258619,0.008029695,0.1528057,0.001145413,0.01538063,0.00004185871],"study_design_candidate":"observational","study_design_consensus":null,"genre_codex":"empirical","genre_gemma":"empirical","genre_scores_codex":[0.9972765,0.0002207896,0.001243353,0.00005035788,0.000008198393,0.000007397559,0.0003475184,0.00001502942,0.0008308809],"genre_scores_gemma":[0.9935807,0.0001794837,0.0044191,0.00003966894,0.00000870871,0.00001012549,0.0007423153,0.00001204171,0.001007857],"genre_candidate":"empirical","genre_consensus":"empirical","teacher_disagreement_score":0.01397732,"threshold_uncertainty_score":0.02779192,"prediction_status":"machine_predicted_unvalidated"},"machine_scores":{"provisional":true,"baseline":true,"maturity_gate_passed":false,"score_opus":0.006707697768614094,"score_gpt":0.2074158645236802,"score_spread":0.2007081667550661,"validation_status":"score_only:v0-immature-baseline","note":"Baseline scores from an immature model (maturity gate not passed). Scores rank; they never assert a category."}}