{"id":"W4402620830","doi":"10.1007/s10096-024-04947-z","title":"Klebsiella pneumoniae with carbapenemases: high prevalence of sequence type 307 with blaOXA181 in South African community hospitals","year":2024,"lang":"en","type":"article","venue":"European Journal of Clinical Microbiology & Infectious Diseases","topic":"Antibiotic Resistance in Bacteria","field":"Biochemistry, Genetics and Molecular Biology","cited_by":3,"is_retracted":false,"has_abstract":true,"ca_institutions":"University of Calgary","funders":"University of Pretoria; National Research Foundation","keywords":"Klebsiella pneumoniae; Medical microbiology; Microbiology; Klebsiella; Biology; Medicine; Escherichia coli; Gene; Genetics","routes":{"ca_aff":true,"ca_fund":false,"ca_venue":false,"about_ca":false,"invisible_to_affiliation_only":false},"retraction":null,"screen":null,"direct_labels":[],"prediction":{"model_version":"metacan-v3-hybrid-931329e0061c","candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0002990644,0.0003845955,0.0002480316,0.001324664,0.0008161974,0.0007179751,0.0002235743,0.0004701097,0.002745125],"category_scores_gemma":[0.001475167,0.0002638846,0.0001224035,0.001274399,0.0006265007,0.0005066222,0.0005479152,0.0002395932,0.0002020061],"about_ca_system_candidate":false,"about_ca_system_consensus":false,"about_ca_system_score_codex":0.0003516977,"about_ca_system_score_gemma":0.0007364089,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_topic_score_codex":0.01123647,"about_ca_topic_score_gemma":0.01733259,"domain_scores_codex":[0.9995859,0.00009289127,0.00004251542,0.00008276194,0.0000690308,0.000126931],"domain_scores_gemma":[0.9993339,0.0001360789,0.0003007519,0.00002240473,0.00009994538,0.0001068246],"domain_codex":null,"domain_gemma":null,"domain_candidate":null,"domain_consensus":null,"study_design_codex":"observational","study_design_gemma":"observational","study_design_scores_codex":[0.00008117336,0.00003056594,0.9831378,0.0001291374,0.00001754051,0.001285779,0.002860747,0.00003318895,0.007920554,0.00005570627,0.00009982237,0.004348016],"study_design_scores_gemma":[0.000006994202,0.0001024111,0.9877937,0.00006341612,0.00001672063,0.002637845,0.007753717,0.0000602186,0.0008423643,0.00004942518,0.0006628839,0.00001027711],"study_design_candidate":"observational","study_design_consensus":"observational","genre_codex":"empirical","genre_gemma":"empirical","genre_scores_codex":[0.9995035,0.0001786132,0.00003593041,0.00004100021,0.000001766493,0.000007604439,0.00005801084,0.000001530107,0.0001720484],"genre_scores_gemma":[0.9996125,0.0001500999,0.00008132814,0.00002776141,0.000003188228,0.000005231149,0.00003482984,8.829181e-7,0.00008416102],"genre_candidate":"empirical","genre_consensus":"empirical","teacher_disagreement_score":0.01123647,"threshold_uncertainty_score":0.02234215,"prediction_status":"machine_predicted_unvalidated"},"machine_scores":{"provisional":true,"baseline":true,"maturity_gate_passed":false,"score_opus":0.01698963875711614,"score_gpt":0.2902752289669944,"score_spread":0.2732855902098782,"validation_status":"score_only:v0-immature-baseline","note":"Baseline scores from an immature model (maturity gate not passed). Scores rank; they never assert a category."}}