{"id":"W4402622680","doi":"10.1016/j.cell.2024.07.022","title":"Microbial colonization programs are structured by breastfeeding and guide healthy respiratory development","year":2024,"lang":"en","type":"article","venue":"Cell","topic":"Breastfeeding Practices and Influences","field":"Medicine","cited_by":65,"is_retracted":false,"has_abstract":true,"ca_institutions":"University of Alberta; McMaster University; University of British Columbia; Hospital for Sick Children; Dalhousie University; BC Children's Hospital; University of Toronto; SickKids Foundation; Children's Hospital Research Institute of Manitoba","funders":"National Institute of Allergy and Infectious Diseases; Canadian Institutes of Health Research; W. Garfield Weston Foundation; University of California, San Diego; National Institutes of Health; DSM Nutritional Products; Genome British Columbia; Canadian Institute for Advanced Research; University of British Columbia; F. Hoffmann-La Roche; Garfield Weston Foundation; National Institute of Diabetes and Digestive and Kidney Diseases; Bill and Melinda Gates Foundation","keywords":"Biology; Colonization; Breastfeeding; Microbiology; Pediatrics","routes":{"ca_aff":true,"ca_fund":true,"ca_venue":false,"about_ca":false,"invisible_to_affiliation_only":false},"retraction":null,"screen":null,"direct_labels":[],"prediction":{"model_version":"codex-gemma-dda1882f352a","candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0002063733,0.0001123393,0.0001371036,0.00005944822,0.0001038484,0.0001307639,0.00004244112,0.00008808231,0.00004489712],"category_scores_gemma":[0.00002137598,0.00009440344,0.0000196608,0.0001616616,0.00004815225,0.0001661101,0.00003118762,0.0001617866,0.00001978168],"about_ca_system_candidate":false,"about_ca_system_consensus":false,"about_ca_system_score_codex":0.00008007349,"about_ca_system_score_gemma":0.0001866549,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_topic_score_codex":0.00003449223,"about_ca_topic_score_gemma":0.00001167691,"domain_scores_codex":[0.9991726,0.00001738272,0.0002215524,0.0002579726,0.0001416519,0.0001887934],"domain_scores_gemma":[0.9996331,0.00002401107,0.00007379038,0.00007438767,0.00006897744,0.000125732],"domain_codex":null,"domain_gemma":null,"domain_candidate":null,"domain_consensus":null,"study_design_codex":"design_other","study_design_gemma":"not_applicable","study_design_scores_codex":[0.0003551244,0.0001979063,0.03968268,0.002485252,0.0001131151,0.00009103011,0.002808739,0.000003113369,0.2581315,0.00006712758,0.1460867,0.5499778],"study_design_scores_gemma":[0.0006184829,0.0002339955,0.0256973,0.0004711998,0.00005669493,0.0001247906,0.0001688827,0.000102268,0.01991132,0.000008739667,0.9524452,0.0001611059],"study_design_candidate":"not_applicable","study_design_consensus":null,"genre_codex":"empirical","genre_gemma":"empirical","genre_scores_codex":[0.9777171,0.009604667,0.0001196867,0.008998431,0.0006611412,0.0004428399,0.000008068198,0.0002041378,0.002243915],"genre_scores_gemma":[0.9954451,0.00008495387,0.001953136,0.001212065,0.0002421374,0.00001272674,0.0000333663,0.00002258452,0.0009939644],"genre_candidate":"empirical","genre_consensus":"empirical","teacher_disagreement_score":0.8063586,"threshold_uncertainty_score":0.3849661,"prediction_status":"machine_predicted_unvalidated"},"machine_scores":{"provisional":true,"baseline":true,"maturity_gate_passed":false,"score_opus":0.02017802544212786,"score_gpt":0.2847178864875843,"score_spread":0.2645398610454565,"validation_status":"score_only:v0-immature-baseline","note":"Baseline scores from an immature model (maturity gate not passed). Scores rank; they never assert a category."}}