{"id":"W4402636444","doi":"10.2196/63562","title":"Methodology for Biological Sample Collection, Processing, and Storage in the Newcastle 1000 Pregnancy Cohort: Protocol for a Longitudinal, Prospective Population-Based Study in Australia","year":2024,"lang":"en","type":"article","venue":"JMIR Research Protocols","topic":"Birth, Development, and Health","field":"Medicine","cited_by":4,"is_retracted":false,"has_abstract":true,"ca_institutions":"","funders":"","keywords":"Biobank; Exposome; Pregnancy; Population; Epigenome; Biorepository; Medicine; Longitudinal study; Microbiome; Biology; Bioinformatics; Environmental health; DNA methylation; Genetics; Pathology","routes":{"ca_aff":false,"ca_fund":false,"ca_venue":true,"about_ca":false,"invisible_to_affiliation_only":true},"retraction":null,"screen":null,"direct_labels":[],"prediction":{"model_version":"metacan-v3-hybrid-931329e0061c","candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.04158118,0.002228533,0.002502513,0.002923941,0.00401195,0.002183944,0.003321831,0.002605121,0.04459487],"category_scores_gemma":[0.0457795,0.002461069,0.002233666,0.002317653,0.001739142,0.001480209,0.002667149,0.003416195,0.01421741],"about_ca_system_candidate":false,"about_ca_system_consensus":false,"about_ca_system_score_codex":0.004744465,"about_ca_system_score_gemma":0.01769812,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_topic_score_codex":0.01849135,"about_ca_topic_score_gemma":0.02842561,"domain_scores_codex":[0.9772862,0.01331342,0.004212758,0.002546373,0.001670577,0.000970598],"domain_scores_gemma":[0.9730852,0.005421232,0.002450224,0.007125681,0.009961691,0.00195608],"domain_codex":null,"domain_gemma":null,"domain_candidate":null,"domain_consensus":null,"study_design_codex":"not_applicable","study_design_gemma":"not_applicable","study_design_scores_codex":[0.03561766,0.007984702,0.05133244,0.03065454,0.001457928,0.002977877,0.01370552,0.007663918,0.01454151,0.02991831,0.5393634,0.2647822],"study_design_scores_gemma":[0.01660307,0.00750325,0.1571746,0.01409565,0.0006240198,0.001095747,0.002629613,0.005866316,0.005729974,0.01400134,0.7740806,0.000595883],"study_design_candidate":"not_applicable","study_design_consensus":"not_applicable","genre_codex":"protocol","genre_gemma":"protocol","genre_scores_codex":[0.006164062,0.0006128278,0.02958081,0.0008325501,0.0006417354,0.9352672,0.01995958,0.0004667362,0.006474444],"genre_scores_gemma":[0.003632872,0.000237415,0.01933507,0.0004806372,0.00007756204,0.9718038,0.002644002,0.0000471226,0.001741499],"genre_candidate":"protocol","genre_consensus":"protocol","teacher_disagreement_score":0.04459487,"threshold_uncertainty_score":0.219905,"prediction_status":"machine_predicted_unvalidated"},"machine_scores":{"provisional":true,"baseline":true,"maturity_gate_passed":false,"score_opus":0.6273835277675068,"score_gpt":0.6355375048813956,"score_spread":0.008153977113888766,"validation_status":"score_only:v0-immature-baseline","note":"Baseline scores from an immature model (maturity gate not passed). Scores rank; they never assert a category."}}