{"id":"W4402636467","doi":"10.1099/ijsem.0.006523","title":"Taxonogenomic analysis of the Xanthomonas translucens complex leads to the descriptions of Xanthomonas cerealis sp. nov. and Xanthomonas graminis sp. nov.","year":2024,"lang":"en","type":"article","venue":"INTERNATIONAL JOURNAL OF SYSTEMATIC AND EVOLUTIONARY MICROBIOLOGY","topic":"Plant Pathogenic Bacteria Studies","field":"Agricultural and Biological Sciences","cited_by":6,"is_retracted":false,"has_abstract":true,"ca_institutions":"University of Saskatchewan; University of Manitoba; Agriculture and Agri-Food Canada","funders":"Agriculture and Agri-Food Canada; Manitoba Crop Alliance; Western Grains Research Foundation; University of Saskatchewan","keywords":"Biology; Pathovar; Xanthomonas; Botany; Microbiology; Acanthaceae; Strain (injury); Bacteria; Genetics; Pseudomonadaceae; Pseudomonas","routes":{"ca_aff":true,"ca_fund":true,"ca_venue":false,"about_ca":false,"invisible_to_affiliation_only":false},"retraction":null,"screen":null,"direct_labels":[],"prediction":{"model_version":"metacan-v3-hybrid-931329e0061c","candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.000228796,0.000561578,0.0003062621,0.001403906,0.0002699212,0.000555513,0.0001279381,0.0002239117,0.0009153364],"category_scores_gemma":[0.0003899569,0.0001194249,0.0006443476,0.0008251356,0.0001611117,0.0004232,0.0004991357,0.0003087728,0.0003938203],"about_ca_system_candidate":false,"about_ca_system_consensus":false,"about_ca_system_score_codex":0.0002205031,"about_ca_system_score_gemma":0.0002470658,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_topic_score_codex":0.00080505,"about_ca_topic_score_gemma":0.0008436695,"domain_scores_codex":[0.9997801,0.00002786984,0.00003150048,0.00008064683,0.00004872519,0.00003122201],"domain_scores_gemma":[0.9997241,0.00004988264,0.0001156337,0.00003010703,0.00004521157,0.00003508297],"domain_codex":null,"domain_gemma":null,"domain_candidate":null,"domain_consensus":null,"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","study_design_scores_codex":[0.0002356686,0.00006287557,0.03033379,0.0003303323,0.0000579919,0.0004267094,0.0003764599,0.0002405727,0.9429333,0.0002237174,0.00008075785,0.02469776],"study_design_scores_gemma":[0.00002841888,0.001549363,0.7355555,0.0002328033,0.0002788503,0.005694243,0.001833723,0.003392001,0.2297228,0.0009693602,0.02069364,0.00004926995],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","genre_codex":"empirical","genre_gemma":"empirical","genre_scores_codex":[0.9864178,0.002393987,0.00702798,0.0001174333,0.00004580728,0.00006558981,0.002724524,0.00004436179,0.001162567],"genre_scores_gemma":[0.9681622,0.002755654,0.01758703,0.00008462743,0.00003806157,0.00009573855,0.008737911,0.00003873152,0.002499824],"genre_candidate":"empirical","genre_consensus":"empirical","teacher_disagreement_score":0.001403906,"threshold_uncertainty_score":0.003062129,"prediction_status":"machine_predicted_unvalidated"},"machine_scores":{"provisional":true,"baseline":true,"maturity_gate_passed":false,"score_opus":0.03629631937091665,"score_gpt":0.2423875127543,"score_spread":0.2060911933833833,"validation_status":"score_only:v0-immature-baseline","note":"Baseline scores from an immature model (maturity gate not passed). Scores rank; they never assert a category."}}