{"id":"W4402704336","doi":"10.1101/2024.09.12.612455","title":"Ongoing evolution of Middle East Respiratory Syndrome Coronavirus, Kingdom of Saudi Arabia, 2023-2024","year":2024,"lang":"en","type":"preprint","venue":"bioRxiv (Cold Spring Harbor Laboratory)","topic":"SARS-CoV-2 and COVID-19 Research","field":"Medicine","cited_by":3,"is_retracted":false,"has_abstract":true,"ca_institutions":"Institute of Infection and Immunity","funders":"","keywords":"Middle East respiratory syndrome coronavirus; Middle East respiratory syndrome; Clade; Biology; Lineage (genetic); Pandemic; Coronavirus; Genetic diversity; Betacoronavirus; Zoology; Phenotype; Virology; Evolutionary biology; Coronavirus disease 2019 (COVID-19); Genetics; Phylogenetics; Gene; Medicine; Environmental health; Infectious disease (medical specialty); Internal medicine","routes":{"ca_aff":true,"ca_fund":false,"ca_venue":false,"about_ca":false,"invisible_to_affiliation_only":false},"retraction":null,"screen":null,"direct_labels":[],"prediction":{"model_version":"metacan-v3-hybrid-931329e0061c","candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0005206011,0.000273386,0.000166384,0.0008075578,0.000484503,0.001241912,0.000304789,0.0005236152,0.002508269],"category_scores_gemma":[0.0007291586,0.0001431998,0.0002607022,0.0009173402,0.0003149438,0.0006063906,0.000539156,0.0004160744,0.0008216822],"about_ca_system_candidate":false,"about_ca_system_consensus":false,"about_ca_system_score_codex":0.001494873,"about_ca_system_score_gemma":0.0007655837,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_topic_score_codex":0.02029411,"about_ca_topic_score_gemma":0.014779,"domain_scores_codex":[0.9997832,0.00004177433,0.00002053981,0.00005256963,0.00004778059,0.00005412613],"domain_scores_gemma":[0.9994568,0.0000442331,0.0001791672,0.00003315302,0.000208565,0.00007796078],"domain_codex":null,"domain_gemma":null,"domain_candidate":null,"domain_consensus":null,"study_design_codex":"observational","study_design_gemma":"observational","study_design_scores_codex":[0.001571103,0.0001192463,0.7330806,0.000348474,0.0002330438,0.002952995,0.004713726,0.001382056,0.151738,0.002121585,0.002876168,0.098863],"study_design_scores_gemma":[0.0000215301,0.000185735,0.9541475,0.00009228442,0.00006388393,0.002342278,0.00365637,0.001046473,0.005791658,0.0004485412,0.03217367,0.0000300044],"study_design_candidate":"observational","study_design_consensus":"observational","genre_codex":"empirical","genre_gemma":"empirical","genre_scores_codex":[0.9956005,0.001587902,0.0002851633,0.000497602,0.00002742586,0.000005248844,0.0003996478,0.000008621959,0.001587931],"genre_scores_gemma":[0.9947664,0.001249876,0.0008176803,0.0003567103,0.00002388076,0.000006276649,0.001347407,0.000009741863,0.001422042],"genre_candidate":"empirical","genre_consensus":"empirical","teacher_disagreement_score":0.02029411,"threshold_uncertainty_score":0.04035193,"prediction_status":"machine_predicted_unvalidated"},"machine_scores":{"provisional":true,"baseline":true,"maturity_gate_passed":false,"score_opus":0.06288622889508004,"score_gpt":0.2994364016178374,"score_spread":0.2365501727227573,"validation_status":"score_only:v0-immature-baseline","note":"Baseline scores from an immature model (maturity gate not passed). Scores rank; they never assert a category."}}