{"id":"W4402723091","doi":"10.3389/fmars.2024.1462905","title":"Transcriptomic responses to hypoxia in two populations of eastern oyster with differing tolerance","year":2024,"lang":"en","type":"article","venue":"Frontiers in Marine Science","topic":"Marine Bivalve and Aquaculture Studies","field":"Environmental Science","cited_by":7,"is_retracted":false,"has_abstract":true,"ca_institutions":"","funders":"Auburn University; U.S. Department of Agriculture; National Institute of Food and Agriculture; National Science Foundation","keywords":"Oyster; Hypoxia (environmental); Transcriptome; Biology; Zoology; Fishery; Ecology; Genetics; Gene; Chemistry; Gene expression; Oxygen","routes":{"ca_aff":false,"ca_fund":false,"ca_venue":false,"about_ca":true,"invisible_to_affiliation_only":true},"retraction":null,"screen":null,"direct_labels":[],"prediction":{"model_version":"codex-gemma-dda1882f352a","candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0003674249,0.0001300106,0.0001876996,0.0002500837,0.00006347657,0.00004605559,0.0003454,0.00001344898,0.00006974937],"category_scores_gemma":[0.00003711546,0.00009837632,0.00002941021,0.001475583,0.0003919481,0.0003444881,0.0003177739,0.0001147978,0.00001596184],"about_ca_system_candidate":false,"about_ca_system_consensus":false,"about_ca_system_score_codex":0.0001502893,"about_ca_system_score_gemma":0.00002264232,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_topic_score_codex":0.0006212434,"about_ca_topic_score_gemma":0.001921882,"domain_scores_codex":[0.9986554,0.00002798939,0.0002294125,0.0004268122,0.0003529763,0.0003073785],"domain_scores_gemma":[0.9996947,0.00001504426,0.00002337008,0.0001952401,0.000007670187,0.00006397843],"domain_codex":null,"domain_gemma":null,"domain_candidate":null,"domain_consensus":null,"study_design_codex":"observational","study_design_gemma":"observational","study_design_scores_codex":[0.00006197149,0.00002234855,0.9761813,0.00001872066,0.00000191176,0.00001307833,0.001251412,0.001407882,0.009416645,0.00009610088,0.0002002023,0.01132843],"study_design_scores_gemma":[0.0002203318,0.00005233268,0.9929072,0.0001044249,0.000004595206,0.000003719244,0.000255267,0.003854146,0.0009107696,0.0006255438,0.0009088303,0.000152872],"study_design_candidate":"observational","study_design_consensus":"observational","genre_codex":"empirical","genre_gemma":"empirical","genre_scores_codex":[0.9893985,0.00003549406,0.002454954,0.0004068751,0.0003628706,0.0002214392,0.000002894081,0.0000219578,0.007095054],"genre_scores_gemma":[0.9660856,0.000006050964,0.03185771,0.00007143943,0.00001625554,0.00002280528,6.278246e-7,0.00000778925,0.001931692],"genre_candidate":"empirical","genre_consensus":"empirical","teacher_disagreement_score":0.02940276,"threshold_uncertainty_score":0.401167,"prediction_status":"machine_predicted_unvalidated"},"machine_scores":{"provisional":true,"baseline":true,"maturity_gate_passed":false,"score_opus":0.01357011585182228,"score_gpt":0.2679373967787044,"score_spread":0.2543672809268821,"validation_status":"score_only:v0-immature-baseline","note":"Baseline scores from an immature model (maturity gate not passed). Scores rank; they never assert a category."}}