{"id":"W4402837138","doi":"10.1002/npp2.8","title":"Targeting of viral RNAs by nonsense‐mediated decay is compromised by virus–plant interactions","year":2024,"lang":"en","type":"article","venue":"New plant protection.","topic":"Plant Virus Research Studies","field":"Agricultural and Biological Sciences","cited_by":4,"is_retracted":false,"has_abstract":true,"ca_institutions":"Agriculture and Agri-Food Canada","funders":"National Natural Science Foundation of China","keywords":"Nonsense; Virology; Nonsense-mediated decay; Biology; Virus; Computational biology; RNA; Genetics; Gene; RNA splicing","routes":{"ca_aff":true,"ca_fund":false,"ca_venue":false,"about_ca":false,"invisible_to_affiliation_only":false},"retraction":null,"screen":null,"direct_labels":[],"prediction":{"model_version":"metacan-v3-hybrid-931329e0061c","candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0004034067,0.0003328279,0.0005263679,0.000248183,0.0002168767,0.0007668911,0.0002421232,0.0003679545,0.0006028038],"category_scores_gemma":[0.0002324724,0.0001561584,0.000386985,0.0001253963,0.0002946258,0.0005088894,0.0003038322,0.0006817076,0.0003974824],"about_ca_system_candidate":false,"about_ca_system_consensus":false,"about_ca_system_score_codex":0.0004209137,"about_ca_system_score_gemma":0.0002219074,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_topic_score_codex":0.0001711572,"about_ca_topic_score_gemma":0.000245387,"domain_scores_codex":[0.9997838,0.00003580764,0.00002016754,0.00005922087,0.00006753355,0.00003350797],"domain_scores_gemma":[0.9998292,0.00006816297,0.00004525507,0.00001212981,0.00002926421,0.00001593777],"domain_codex":null,"domain_gemma":null,"domain_candidate":null,"domain_consensus":null,"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","study_design_scores_codex":[0.0000699927,0.00001323387,0.0004499815,0.0005630971,0.0000342072,0.0002489761,0.00004900114,0.0001848982,0.9649364,0.001781989,0.0002445734,0.0314238],"study_design_scores_gemma":[0.00001903482,0.0005715762,0.007648089,0.0002154612,0.000117656,0.003326686,0.0001229811,0.001371783,0.8666216,0.002839188,0.1171095,0.00003637264],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","genre_codex":"review","genre_gemma":"empirical","genre_scores_codex":[0.3975962,0.5533647,0.02879792,0.0007908841,0.0006266111,0.00005892839,0.0002565547,0.0005188637,0.01798934],"genre_scores_gemma":[0.7600037,0.2252961,0.007213681,0.0004454325,0.0002585851,0.00004956165,0.0004655467,0.00008849376,0.006178919],"genre_candidate":"empirical","genre_consensus":null,"teacher_disagreement_score":0.0007668911,"threshold_uncertainty_score":0.003053963,"prediction_status":"machine_predicted_unvalidated"},"machine_scores":{"provisional":true,"baseline":true,"maturity_gate_passed":false,"score_opus":0.0324397760253029,"score_gpt":0.2549136776640345,"score_spread":0.2224739016387316,"validation_status":"score_only:v0-immature-baseline","note":"Baseline scores from an immature model (maturity gate not passed). Scores rank; they never assert a category."}}