{"id":"W4402914607","doi":"10.1101/2024.09.26.24314455","title":"Detection of diphtheria toxin-producing <i>Corynebacterium ramonii</i> in wounds of an urban, inner-city population in Vancouver, Canada, 2019-2023","year":2024,"lang":"en","type":"preprint","venue":"medRxiv","topic":"Diphtheria, Corynebacterium, and Tetanus","field":"Biochemistry, Genetics and Molecular Biology","cited_by":0,"is_retracted":false,"has_abstract":true,"ca_institutions":"St. Paul's Hospital; University of British Columbia","funders":"British Columbia Centre for Disease Control","keywords":"Corynebacterium diphtheriae; Diphtheria; Diphtheria toxin; Toxin; Population; Microbiology; Geography; Medicine; Environmental health; Biology; Virology","routes":{"ca_aff":true,"ca_fund":true,"ca_venue":false,"about_ca":true,"invisible_to_affiliation_only":false},"retraction":null,"screen":null,"direct_labels":[],"prediction":{"model_version":"codex-gemma-dda1882f352a","candidate_categories":["metaepi_narrow"],"consensus_categories":[],"category_scores_codex":[0.0006325011,0.0003834133,0.0005978015,0.0002240252,0.00002269656,0.00002704415,0.000387085,0.000418706,0.00002004328],"category_scores_gemma":[0.0001402684,0.0004071294,0.0001316895,0.0002971395,0.00006321107,0.00001184395,0.0004666777,0.0004764644,8.072494e-7],"about_ca_system_candidate":false,"about_ca_system_consensus":false,"about_ca_system_score_codex":0.0001932262,"about_ca_system_score_gemma":0.0004986766,"about_ca_topic_candidate":true,"about_ca_topic_consensus":true,"about_ca_topic_score_codex":0.2804665,"about_ca_topic_score_gemma":0.8395675,"domain_scores_codex":[0.9974238,0.0002149507,0.0008668095,0.0008775321,0.0002758396,0.0003410419],"domain_scores_gemma":[0.9984128,0.00001698828,0.0004295507,0.0009262112,0.0001309859,0.00008339674],"domain_codex":null,"domain_gemma":null,"domain_candidate":null,"domain_consensus":null,"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","study_design_scores_codex":[0.0002769696,0.0001493151,0.0778531,0.0004955465,0.00006599758,0.00002388665,0.0001423071,0.0004770944,0.9177994,0.000002589626,0.0002344994,0.002479356],"study_design_scores_gemma":[0.0006158696,0.0002618722,0.457753,0.0003600959,0.00005607196,0.000006544658,0.00009003184,0.0002448168,0.5375328,0.0003662616,0.002117093,0.0005954712],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","genre_codex":"empirical","genre_gemma":"empirical","genre_scores_codex":[0.994209,0.0007589726,0.00002738444,0.0000220264,0.004056782,0.0004059463,0.0001925019,0.00001605878,0.0003113459],"genre_scores_gemma":[0.998309,0.00008401396,0.00008881427,0.00003041335,0.0003087959,0.00004833342,0.0003545038,0.00006583738,0.0007102565],"genre_candidate":"empirical","genre_consensus":"empirical","teacher_disagreement_score":0.559101,"threshold_uncertainty_score":0.9998381,"prediction_status":"machine_predicted_unvalidated"},"machine_scores":{"provisional":true,"baseline":true,"maturity_gate_passed":false,"score_opus":0.00742846441001265,"score_gpt":0.2263298463959977,"score_spread":0.218901381985985,"validation_status":"score_only:v0-immature-baseline","note":"Baseline scores from an immature model (maturity gate not passed). Scores rank; they never assert a category."}}