{"id":"W4402961953","doi":"10.1101/2024.09.27.615432","title":"PEG Adjustment Enables Genome Transplantation Using <i>Mycoplasma Mycoides</i> Recipient","year":2024,"lang":"en","type":"preprint","venue":"bioRxiv (Cold Spring Harbor Laboratory)","topic":"Bacteriophages and microbial interactions","field":"Environmental Science","cited_by":2,"is_retracted":false,"has_abstract":true,"ca_institutions":"Western University","funders":"Natural Sciences and Engineering Research Council of Canada; National Science Foundation","keywords":"Mycoplasma mycoides; Transplantation; Biology; Genome; PEG ratio; Virology; Microbiology; Mycoplasma; Genetics; Medicine; Gene; Business; Internal medicine","routes":{"ca_aff":true,"ca_fund":true,"ca_venue":false,"about_ca":false,"invisible_to_affiliation_only":false},"retraction":null,"screen":null,"direct_labels":[],"prediction":{"model_version":"metacan-v3-hybrid-931329e0061c","candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.000212439,0.0002849819,0.0001517218,0.0001280611,0.0001514774,0.000336176,0.0002560235,0.0003501047,0.001219484],"category_scores_gemma":[0.0001984927,0.0001217828,0.0001946521,0.0001283268,0.0001502007,0.0002309509,0.0003376881,0.0005454643,0.0005206921],"about_ca_system_candidate":false,"about_ca_system_consensus":false,"about_ca_system_score_codex":0.0001652149,"about_ca_system_score_gemma":0.0001108153,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_topic_score_codex":0.0003898753,"about_ca_topic_score_gemma":0.0002899786,"domain_scores_codex":[0.9998647,0.00002053416,0.00001383144,0.00004310592,0.00003016061,0.00002770184],"domain_scores_gemma":[0.9998409,0.00002876818,0.00006071562,0.00003399302,0.00001435626,0.0000213727],"domain_codex":null,"domain_gemma":null,"domain_candidate":null,"domain_consensus":null,"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","study_design_scores_codex":[0.00002111483,0.00000919386,0.00008205621,0.00001014436,0.000001486472,0.00002084557,0.000008537,0.00003544246,0.9989999,0.00009106906,0.00002662662,0.0006937164],"study_design_scores_gemma":[0.000002109016,0.00003082446,0.0004362198,0.000001898416,0.000003524101,0.00005380327,0.00000509865,0.0003854378,0.9975513,0.00001829597,0.001509692,0.000001770068],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","genre_codex":"empirical","genre_gemma":"empirical","genre_scores_codex":[0.9714913,0.0003557236,0.02413755,0.0001278436,0.00007305669,0.00005885742,0.0003507399,0.0004016559,0.003003213],"genre_scores_gemma":[0.9801378,0.0002537487,0.01557796,0.00006891888,0.000009751137,0.00003028092,0.0006341865,0.0001568106,0.003130698],"genre_candidate":"empirical","genre_consensus":"empirical","teacher_disagreement_score":0.001219484,"threshold_uncertainty_score":0.00407958,"prediction_status":"machine_predicted_unvalidated"},"machine_scores":{"provisional":true,"baseline":true,"maturity_gate_passed":false,"score_opus":0.01252360274728538,"score_gpt":0.2155194745253309,"score_spread":0.2029958717780456,"validation_status":"score_only:v0-immature-baseline","note":"Baseline scores from an immature model (maturity gate not passed). Scores rank; they never assert a category."}}