{"id":"W4403151080","doi":"10.1101/2024.10.04.616699","title":"Electrogenic Dynamics of Biofilm Formation: Correlation Between Genetic Expression and Electrochemical Activity in <i>Bacillus subtilis</i>","year":2024,"lang":"en","type":"preprint","venue":"bioRxiv (Cold Spring Harbor Laboratory)","topic":"Plant and Biological Electrophysiology Studies","field":"Agricultural and Biological Sciences","cited_by":0,"is_retracted":false,"has_abstract":true,"ca_institutions":"University of British Columbia","funders":"","keywords":"Bacillus subtilis; Biofilm; Dynamics (music); Electrochemistry; Expression (computer science); Chemistry; Protein expression; Correlation; Biophysics; Cell biology; Chemical physics; Biology; Genetics; Biochemistry; Bacteria; Physics; Electrode; Computer science; Mathematics; Physical chemistry; Gene","routes":{"ca_aff":true,"ca_fund":false,"ca_venue":false,"about_ca":false,"invisible_to_affiliation_only":false},"retraction":null,"screen":null,"direct_labels":[],"prediction":{"model_version":"metacan-v3-hybrid-931329e0061c","candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0001772599,0.000184163,0.0001970191,0.0002799987,0.00008946512,0.0003412152,0.0001061208,0.0002810798,0.0003398572],"category_scores_gemma":[0.0003927007,0.000142805,0.0001184103,0.0002587341,0.0001616854,0.0001541851,0.0001762132,0.0003941328,0.0001293671],"about_ca_system_candidate":false,"about_ca_system_consensus":false,"about_ca_system_score_codex":0.0001440386,"about_ca_system_score_gemma":0.00009028109,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_topic_score_codex":0.0009005354,"about_ca_topic_score_gemma":0.0003918169,"domain_scores_codex":[0.9998363,0.00003102178,0.00001275693,0.0000384788,0.00005404473,0.0000273994],"domain_scores_gemma":[0.9996021,0.00007595091,0.0001335902,0.00001625109,0.0001068551,0.00006526064],"domain_codex":null,"domain_gemma":null,"domain_candidate":null,"domain_consensus":null,"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","study_design_scores_codex":[0.00005399653,0.00001772106,0.001277005,0.0000115537,0.000003274613,0.00001530239,0.00002415952,0.00004764077,0.9978688,0.00001327846,0.00001410658,0.000653098],"study_design_scores_gemma":[0.00001133633,0.0005247084,0.1592782,0.00001502963,0.00002567195,0.0003321562,0.0002559173,0.005582932,0.8332131,0.00009554592,0.0006374064,0.00002804649],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","genre_codex":"empirical","genre_gemma":"empirical","genre_scores_codex":[0.9977314,0.0003491616,0.001348334,0.00003056193,0.000004523215,0.000006740266,0.0001903434,0.00002172152,0.000317192],"genre_scores_gemma":[0.9985024,0.0001182263,0.0008646254,0.00001499751,0.000002011893,0.00001195766,0.000241005,0.00000562759,0.0002391806],"genre_candidate":"empirical","genre_consensus":"empirical","teacher_disagreement_score":0.0009005354,"threshold_uncertainty_score":0.001790524,"prediction_status":"machine_predicted_unvalidated"},"machine_scores":{"provisional":true,"baseline":true,"maturity_gate_passed":false,"score_opus":0.01088685622107352,"score_gpt":0.1915765694114566,"score_spread":0.1806897131903831,"validation_status":"score_only:v0-immature-baseline","note":"Baseline scores from an immature model (maturity gate not passed). Scores rank; they never assert a category."}}