{"id":"W4403156819","doi":"10.1111/jbi.15022","title":"Phylogeography of the Red‐Headed Manakin Supports the River‐Refuge Hypothesis","year":2024,"lang":"en","type":"article","venue":"Journal of Biogeography","topic":"Ecology and biodiversity studies","field":"Environmental Science","cited_by":3,"is_retracted":false,"has_abstract":true,"ca_institutions":"The Scarborough Hospital; University of Toronto","funders":"Fundação Amazônia Paraense de Amparo à Pesquisa; Conselho Nacional de Desenvolvimento Científico e Tecnológico; Instituto Chico Mendes de Conservação da Biodiversidade; Natural Sciences and Engineering Research Council of Canada; Coordenação de Aperfeiçoamento de Pessoal de Nível Superior","keywords":"Phylogeography; Ecology; Geography; Biogeography; Oceanography; Biology; Geology; Phylogenetics","routes":{"ca_aff":true,"ca_fund":true,"ca_venue":false,"about_ca":false,"invisible_to_affiliation_only":false},"retraction":null,"screen":null,"direct_labels":[],"prediction":{"model_version":"metacan-v3-hybrid-931329e0061c","candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.000244515,0.0001178104,0.000227894,0.0003906158,0.0004215423,0.0004547585,0.0002731364,0.0001490693,0.002551347],"category_scores_gemma":[0.0006554598,0.0001133038,0.0001493083,0.0003961565,0.0003530066,0.0002203509,0.00031381,0.0001959533,0.0001649912],"about_ca_system_candidate":false,"about_ca_system_consensus":false,"about_ca_system_score_codex":0.000282919,"about_ca_system_score_gemma":0.0002000333,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_topic_score_codex":0.008649091,"about_ca_topic_score_gemma":0.01917345,"domain_scores_codex":[0.9998543,0.00003350488,0.000008818284,0.00006138482,0.00001775083,0.00002422926],"domain_scores_gemma":[0.9996516,0.00009533702,0.0001231883,0.00003214727,0.00004380259,0.00005383681],"domain_codex":null,"domain_gemma":null,"domain_candidate":null,"domain_consensus":null,"study_design_codex":"observational","study_design_gemma":"observational","study_design_scores_codex":[0.0001615077,0.00003169775,0.9665533,0.00004297365,0.0001499026,0.0002412102,0.00135342,0.0004376487,0.02176143,0.0004792802,0.0001325734,0.00865503],"study_design_scores_gemma":[0.00001196661,0.00002394207,0.9965852,0.0000126725,0.00003948054,0.0001750086,0.0008692316,0.001149418,0.0004736795,0.0001111444,0.000542391,0.000005777737],"study_design_candidate":"observational","study_design_consensus":"observational","genre_codex":"empirical","genre_gemma":"empirical","genre_scores_codex":[0.9992359,0.00004551908,0.0001326074,0.00001426411,0.000001119333,0.000001978703,0.00003470821,0.000002621849,0.0005313142],"genre_scores_gemma":[0.9998221,0.00001444158,0.00007738737,0.000005849262,9.135983e-7,0.000001289352,0.00003053597,0.000001003376,0.00004662738],"genre_candidate":"empirical","genre_consensus":"empirical","teacher_disagreement_score":0.008649091,"threshold_uncertainty_score":0.01719749,"prediction_status":"machine_predicted_unvalidated"},"machine_scores":{"provisional":true,"baseline":true,"maturity_gate_passed":false,"score_opus":0.008044293803812129,"score_gpt":0.18985889005936,"score_spread":0.1818145962555479,"validation_status":"score_only:v0-immature-baseline","note":"Baseline scores from an immature model (maturity gate not passed). Scores rank; they never assert a category."}}