{"id":"W4403172854","doi":"10.1038/s41598-024-73752-7","title":"Landscape of evolutionary arms races between transposable elements and KRAB-ZFP family","year":2024,"lang":"en","type":"article","venue":"Scientific Reports","topic":"Chromosomal and Genetic Variations","field":"Agricultural and Biological Sciences","cited_by":18,"is_retracted":false,"has_abstract":true,"ca_institutions":"","funders":"Institute of Genetics; Japan Society for the Promotion of Science; École Polytechnique Fédérale de Lausanne; Ministry of Education, Culture, Sports, Science and Technology","keywords":"Transposable element; Evolutionary biology; Biology; Genetics; Genome; Gene","routes":{"ca_aff":false,"ca_fund":true,"ca_venue":false,"about_ca":false,"invisible_to_affiliation_only":true},"retraction":null,"screen":null,"direct_labels":[],"prediction":{"model_version":"metacan-v3-hybrid-931329e0061c","candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0002587025,0.0001215297,0.0002495416,0.0005960503,0.0003441064,0.0004287547,0.0002677415,0.0001985615,0.001921596],"category_scores_gemma":[0.0006979729,0.0001542543,0.0002122615,0.0006590566,0.0003461934,0.0004653903,0.0004038939,0.0003920526,0.0002718706],"about_ca_system_candidate":false,"about_ca_system_consensus":false,"about_ca_system_score_codex":0.0002790058,"about_ca_system_score_gemma":0.0002376008,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_topic_score_codex":0.001178231,"about_ca_topic_score_gemma":0.002687505,"domain_scores_codex":[0.999728,0.00002690967,0.0000107807,0.0001506307,0.00003772996,0.00004589466],"domain_scores_gemma":[0.9996778,0.0001098306,0.0001078542,0.00002419201,0.00003971625,0.00004062364],"domain_codex":null,"domain_gemma":null,"domain_candidate":null,"domain_consensus":null,"study_design_codex":"bench_or_experimental","study_design_gemma":"observational","study_design_scores_codex":[0.0005268184,0.00004580355,0.2226012,0.000312572,0.0002767159,0.0007176708,0.001033899,0.002053126,0.7300928,0.005022653,0.0007230578,0.03659378],"study_design_scores_gemma":[0.00002624455,0.0001332612,0.9273674,0.00004699843,0.0002481096,0.001252931,0.001016693,0.01263658,0.03895995,0.005218773,0.01304187,0.00005115346],"study_design_candidate":"observational","study_design_consensus":null,"genre_codex":"empirical","genre_gemma":"empirical","genre_scores_codex":[0.994331,0.0008783843,0.002603353,0.00005889631,0.000003853174,0.000004509843,0.0007016835,0.00003827602,0.00138002],"genre_scores_gemma":[0.9972796,0.0002155737,0.001113941,0.00007736318,0.000004412713,0.000008533637,0.0007376414,0.00001694546,0.0005458856],"genre_candidate":"empirical","genre_consensus":"empirical","teacher_disagreement_score":0.001921596,"threshold_uncertainty_score":0.006428361,"prediction_status":"machine_predicted_unvalidated"},"machine_scores":{"provisional":true,"baseline":true,"maturity_gate_passed":false,"score_opus":0.01631168985384529,"score_gpt":0.2235554009254386,"score_spread":0.2072437110715933,"validation_status":"score_only:v0-immature-baseline","note":"Baseline scores from an immature model (maturity gate not passed). Scores rank; they never assert a category."}}