{"id":"W4403215547","doi":"10.1093/gbe/evae214","title":"The Evolution of Gene Expression Plasticity During Adaptation to Salt in <i>Chlamydomonas reinhardtii</i>","year":2024,"lang":"en","type":"article","venue":"Genome Biology and Evolution","topic":"Physiological and biochemical adaptations","field":"Environmental Science","cited_by":4,"is_retracted":false,"has_abstract":true,"ca_institutions":"Amgen (Canada); University of Toronto","funders":"","keywords":"Biology; Chlamydomonas reinhardtii; Phenotypic plasticity; Adaptation (eye); Genetics; Gene; Evolutionary biology; Chlamydomonas; Experimental evolution; Population; Transcriptome; Phenotype; Gene expression; Mutant","routes":{"ca_aff":true,"ca_fund":false,"ca_venue":false,"about_ca":false,"invisible_to_affiliation_only":false},"retraction":null,"screen":null,"direct_labels":[],"prediction":{"model_version":"codex-gemma-dda1882f352a","candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0001277544,0.00007246308,0.0000790435,0.00002526193,0.0001417077,0.000006624611,0.00007808201,0.00008276987,0.00002587728],"category_scores_gemma":[0.00005796352,0.00004596747,0.0000245707,0.0002283566,0.0001540131,0.0000672742,0.00008971519,0.00008673929,0.00005258],"about_ca_system_candidate":false,"about_ca_system_consensus":false,"about_ca_system_score_codex":0.0002048042,"about_ca_system_score_gemma":0.000009883662,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_topic_score_codex":0.0002623519,"about_ca_topic_score_gemma":0.0001148763,"domain_scores_codex":[0.9993045,0.00005685047,0.0001737626,0.000236269,0.000061651,0.0001669975],"domain_scores_gemma":[0.9997735,0.00008378273,0.00002892005,0.0000624488,0.000006713172,0.00004461874],"domain_codex":null,"domain_gemma":null,"domain_candidate":null,"domain_consensus":null,"study_design_codex":"bench_or_experimental","study_design_gemma":"observational","study_design_scores_codex":[0.00006462204,0.00001602997,0.00375631,0.000006557454,0.000002336004,4.345918e-7,0.0001005978,0.001598407,0.9931583,0.0008132788,0.00001902378,0.0004641168],"study_design_scores_gemma":[0.0001315213,0.000118429,0.9323458,0.00002639791,0.00000635369,0.000003745904,0.0001222753,0.003125025,0.04871397,0.0148357,0.000457705,0.0001130574],"study_design_candidate":"bench_or_experimental","study_design_consensus":null,"genre_codex":"empirical","genre_gemma":"empirical","genre_scores_codex":[0.9882112,0.0007087141,0.01048441,0.0001753982,0.00007676898,0.0001284789,0.00001475746,0.00002286605,0.0001774669],"genre_scores_gemma":[0.9992338,0.00005111054,0.0005490309,0.0000146343,0.00004332623,0.0000243621,0.00001092816,0.000002715593,0.0000700401],"genre_candidate":"empirical","genre_consensus":"empirical","teacher_disagreement_score":0.9444443,"threshold_uncertainty_score":0.1874499,"prediction_status":"machine_predicted_unvalidated"},"machine_scores":{"provisional":true,"baseline":true,"maturity_gate_passed":false,"score_opus":0.01018852224783781,"score_gpt":0.2167990589792884,"score_spread":0.2066105367314506,"validation_status":"score_only:v0-immature-baseline","note":"Baseline scores from an immature model (maturity gate not passed). Scores rank; they never assert a category."}}