{"id":"W4403313242","doi":"10.3389/fpls.2024.1415082","title":"Gene expression signatures of mutualism and pathogenesis in flax roots","year":2024,"lang":"en","type":"article","venue":"Frontiers in Plant Science","topic":"Mycorrhizal Fungi and Plant Interactions","field":"Agricultural and Biological Sciences","cited_by":0,"is_retracted":false,"has_abstract":true,"ca_institutions":"University of British Columbia, Okanagan Campus; University of British Columbia; University of Alberta","funders":"Agriculture and Agri-Food Canada; Natural Sciences and Engineering Research Council of Canada; Coordenação de Aperfeiçoamento de Pessoal de Nível Superior; Genome Canada","keywords":"Biology; Fusarium oxysporum; Linum; Fungus; Gene; Botany; Symbiosis; Pathogenic fungus; Transcriptome; Plant defense against herbivory; Microbiology; Gene expression; Bacteria; Genetics","routes":{"ca_aff":true,"ca_fund":true,"ca_venue":false,"about_ca":false,"invisible_to_affiliation_only":false},"retraction":null,"screen":null,"direct_labels":[],"prediction":{"model_version":"metacan-v3-hybrid-931329e0061c","candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0001038991,0.0003865897,0.0003378539,0.0005145585,0.0003141147,0.0003229897,0.00009223492,0.0003415706,0.001069111],"category_scores_gemma":[0.0001122401,0.0001309801,0.00026192,0.0004322634,0.0001781174,0.0002435661,0.0003284508,0.0002657464,0.0002038386],"about_ca_system_candidate":false,"about_ca_system_consensus":false,"about_ca_system_score_codex":0.0002694157,"about_ca_system_score_gemma":0.0001623362,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_topic_score_codex":0.001107534,"about_ca_topic_score_gemma":0.001272286,"domain_scores_codex":[0.9998125,0.000009970951,0.00000735078,0.000101769,0.00002624529,0.00004215154],"domain_scores_gemma":[0.9998931,0.0000154691,0.0000479,0.000004455729,0.00001919068,0.00001988546],"domain_codex":null,"domain_gemma":null,"domain_candidate":null,"domain_consensus":null,"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","study_design_scores_codex":[0.0001016969,0.000008437201,0.006265729,0.00009263419,0.00001068187,0.00005005634,0.00006844971,0.00005229536,0.9911357,0.00003544351,0.00009233642,0.002086486],"study_design_scores_gemma":[0.00001530202,0.0002940805,0.8972313,0.00004012497,0.00006981967,0.0005524437,0.0003181563,0.001474877,0.09535939,0.0001923629,0.004424498,0.00002766935],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","genre_codex":"empirical","genre_gemma":"empirical","genre_scores_codex":[0.989677,0.002917526,0.001362792,0.0001121649,0.0000170136,0.00002271639,0.004674637,0.0001292571,0.001086974],"genre_scores_gemma":[0.9900394,0.0006031255,0.00185935,0.0001636937,0.0000209762,0.00007203822,0.004723788,0.00002317933,0.002494412],"genre_candidate":"empirical","genre_consensus":"empirical","teacher_disagreement_score":0.001107534,"threshold_uncertainty_score":0.003576517,"prediction_status":"machine_predicted_unvalidated"},"machine_scores":{"provisional":true,"baseline":true,"maturity_gate_passed":false,"score_opus":0.008169098806911489,"score_gpt":0.2066903847023456,"score_spread":0.1985212858954341,"validation_status":"score_only:v0-immature-baseline","note":"Baseline scores from an immature model (maturity gate not passed). Scores rank; they never assert a category."}}