{"id":"W4403342900","doi":"10.3389/fimmu.2024.1437767","title":"Tertiary lymphoid structures and B-cell infiltration are IPF features with functional consequences","year":2024,"lang":"en","type":"article","venue":"Frontiers in Immunology","topic":"Interstitial Lung Diseases and Idiopathic Pulmonary Fibrosis","field":"Medicine","cited_by":20,"is_retracted":false,"has_abstract":true,"ca_institutions":"McGill University; Christie (Canada)","funders":"Università degli Studi di Padova","keywords":"Medicine; Idiopathic pulmonary fibrosis; Stage (stratigraphy); CD8; Lung; Inflammation; Immune system; Lymphatic system; Pathology; Fibrosis; Internal medicine; Immunology; Gastroenterology; Biology","routes":{"ca_aff":true,"ca_fund":false,"ca_venue":false,"about_ca":false,"invisible_to_affiliation_only":false},"retraction":null,"screen":null,"direct_labels":[],"prediction":{"model_version":"metacan-v3-hybrid-931329e0061c","candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0004047503,0.0004135354,0.0003451877,0.00115888,0.0002666367,0.0003483207,0.0001790297,0.0003813184,0.003305717],"category_scores_gemma":[0.0007972103,0.0001299734,0.0002047155,0.0002875488,0.000571533,0.0003013007,0.0003358989,0.0003092059,0.0003267135],"about_ca_system_candidate":false,"about_ca_system_consensus":false,"about_ca_system_score_codex":0.000154346,"about_ca_system_score_gemma":0.00007492863,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_topic_score_codex":0.000230532,"about_ca_topic_score_gemma":0.0002441236,"domain_scores_codex":[0.9997912,0.00004461809,0.00001897211,0.00005067037,0.00004250331,0.00005201361],"domain_scores_gemma":[0.9988707,0.0002302907,0.0005137777,0.00007396672,0.00009796898,0.000213267],"domain_codex":null,"domain_gemma":null,"domain_candidate":null,"domain_consensus":null,"study_design_codex":"observational","study_design_gemma":"observational","study_design_scores_codex":[0.001379977,0.0000911252,0.8460432,0.0001538161,0.00006172511,0.004130073,0.0002039955,0.0001094679,0.1282206,0.0001384731,0.0002510697,0.01921643],"study_design_scores_gemma":[0.00001446488,0.0002834032,0.9810749,0.0000158453,0.00003244826,0.01380561,0.0001393038,0.0001395547,0.00383604,0.0001337022,0.0005200582,0.000004654264],"study_design_candidate":"observational","study_design_consensus":"observational","genre_codex":"empirical","genre_gemma":"empirical","genre_scores_codex":[0.997268,0.001138297,0.0005028218,0.00004019945,0.000004430972,0.00001331829,0.00007935239,0.00002965394,0.0009240551],"genre_scores_gemma":[0.99944,0.0001361203,0.0002127213,0.00001236855,0.00002285291,0.000004965205,0.00006136594,0.000002169611,0.0001075165],"genre_candidate":"empirical","genre_consensus":"empirical","teacher_disagreement_score":0.003305717,"threshold_uncertainty_score":0.01105869,"prediction_status":"machine_predicted_unvalidated"},"machine_scores":{"provisional":true,"baseline":true,"maturity_gate_passed":false,"score_opus":0.00505052844418631,"score_gpt":0.2087845216379751,"score_spread":0.2037339931937888,"validation_status":"score_only:v0-immature-baseline","note":"Baseline scores from an immature model (maturity gate not passed). Scores rank; they never assert a category."}}