{"id":"W4403381170","doi":"10.1128/mra.00986-24","title":"Complete genome sequence of marine prosthecate bacterium <i>Fretibacter rubidus</i> type strain JCM 15585","year":2024,"lang":"en","type":"article","venue":"Microbiology Resource Announcements","topic":"Genomics and Phylogenetic Studies","field":"Biochemistry, Genetics and Molecular Biology","cited_by":1,"is_retracted":false,"has_abstract":true,"ca_institutions":"","funders":"Université de Montréal","keywords":"Biology; Alphaproteobacteria; Whole genome sequencing; Genome; Strain (injury); Type (biology); Genetics; Gene; Evolutionary biology; 16S ribosomal RNA; Ecology; Anatomy","routes":{"ca_aff":false,"ca_fund":true,"ca_venue":false,"about_ca":false,"invisible_to_affiliation_only":true},"retraction":null,"screen":null,"direct_labels":[],"prediction":{"model_version":"metacan-v3-hybrid-931329e0061c","candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.000213151,0.0009434862,0.0009243481,0.001285997,0.000658699,0.0006009752,0.0005567587,0.0005424651,0.002279366],"category_scores_gemma":[0.0004538329,0.0002663628,0.0005857944,0.003214265,0.0002777025,0.0003152556,0.0002998449,0.0007932395,0.002208602],"about_ca_system_candidate":false,"about_ca_system_consensus":false,"about_ca_system_score_codex":0.0006806545,"about_ca_system_score_gemma":0.002085254,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_topic_score_codex":0.02716754,"about_ca_topic_score_gemma":0.01526233,"domain_scores_codex":[0.9997451,0.00001511681,0.00002624337,0.0000896468,0.00007951847,0.00004439566],"domain_scores_gemma":[0.9995976,0.00005744268,0.00009319405,0.00003575467,0.0001137377,0.0001023558],"domain_codex":null,"domain_gemma":null,"domain_candidate":null,"domain_consensus":null,"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","study_design_scores_codex":[0.001069504,0.0001492823,0.004884546,0.001630926,0.00005837164,0.0006891267,0.0003993659,0.0005141216,0.9642811,0.0003515644,0.005504868,0.0204672],"study_design_scores_gemma":[0.0004744716,0.001302104,0.5238002,0.0006144746,0.001094241,0.003563979,0.001729449,0.003383879,0.2725222,0.0007810182,0.1904533,0.0002807256],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","genre_codex":"empirical","genre_gemma":"empirical","genre_scores_codex":[0.5817338,0.003668954,0.009903129,0.0005101466,0.0003151482,0.0004848407,0.3943333,0.001047554,0.008003086],"genre_scores_gemma":[0.2800937,0.002706464,0.02030639,0.0003683024,0.0001137769,0.0002936774,0.6882226,0.0003445743,0.007550469],"genre_candidate":"empirical","genre_consensus":"empirical","teacher_disagreement_score":0.02716754,"threshold_uncertainty_score":0.05401886,"prediction_status":"machine_predicted_unvalidated"},"machine_scores":{"provisional":true,"baseline":true,"maturity_gate_passed":false,"score_opus":0.02015882814436636,"score_gpt":0.24161261580609,"score_spread":0.2214537876617236,"validation_status":"score_only:v0-immature-baseline","note":"Baseline scores from an immature model (maturity gate not passed). Scores rank; they never assert a category."}}