{"id":"W4403451189","doi":"10.1080/19490976.2024.2412676","title":"<i>Giardia</i> spp.-induced microbiota dysbiosis disrupts intestinal mucin glycosylation","year":2024,"lang":"en","type":"article","venue":"Gut Microbes","topic":"Parasitic Infections and Diagnostics","field":"Immunology and Microbiology","cited_by":8,"is_retracted":false,"has_abstract":true,"ca_institutions":"University of Calgary","funders":"Natural Sciences and Engineering Research Council of Canada; International Microbiome Centre, University of Calgary; Canadian Network for Research and Innovation in Machining Technology, Natural Sciences and Engineering Research Council of Canada; Canterbury Medical Research Foundation","keywords":"Biology; Dysbiosis; Mucin; Microbiology; Giardia; Glycosylation; Gut flora; Mucin 2; Microbiome; Immunology; Genetics; Biochemistry; Gene","routes":{"ca_aff":true,"ca_fund":true,"ca_venue":false,"about_ca":false,"invisible_to_affiliation_only":false},"retraction":null,"screen":null,"direct_labels":[],"prediction":{"model_version":"codex-gemma-dda1882f352a","candidate_categories":["metaepi_narrow","insufficient_payload"],"consensus_categories":["insufficient_payload"],"category_scores_codex":[0.0002142617,0.0002839083,0.0002734339,0.000235518,0.0002714674,0.0001172373,0.0001755442,0.0003046726,0.001187889],"category_scores_gemma":[0.0001941232,0.0002602553,0.0001823921,0.0003400397,0.0001478526,0.0001551848,0.0001014122,0.000420008,0.009333188],"about_ca_system_candidate":false,"about_ca_system_consensus":false,"about_ca_system_score_codex":0.0001041327,"about_ca_system_score_gemma":0.0001179416,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_topic_score_codex":0.000261735,"about_ca_topic_score_gemma":0.00007610831,"domain_scores_codex":[0.9985321,0.0001159137,0.0003611442,0.0004761501,0.00003067749,0.0004840528],"domain_scores_gemma":[0.99908,0.000415138,0.00005691962,0.0003193512,0.00009156283,0.00003702364],"domain_codex":null,"domain_gemma":null,"domain_candidate":null,"domain_consensus":null,"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","study_design_scores_codex":[0.00002102614,0.0001099543,0.001886095,0.00004919783,0.0001349503,0.00003421133,0.0001967198,0.000004600459,0.9371222,0.001135041,0.05270657,0.006599437],"study_design_scores_gemma":[0.0007418478,0.0002204274,0.01181273,0.0004161389,0.0002397807,0.001322763,0.00009043179,0.00004262854,0.7253768,0.0003376457,0.2588113,0.0005874964],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","genre_codex":"empirical","genre_gemma":"empirical","genre_scores_codex":[0.9815131,0.005554502,0.001767132,0.0006464506,0.003958402,0.000297025,0.0001735522,0.0004403603,0.00564951],"genre_scores_gemma":[0.9965385,0.0001184463,0.0004060942,0.0003294834,0.0001607458,0.00002564821,0.0003015244,0.00003697977,0.002082552],"genre_candidate":"empirical","genre_consensus":"empirical","teacher_disagreement_score":0.2117454,"threshold_uncertainty_score":0.999985,"prediction_status":"machine_predicted_unvalidated"},"machine_scores":{"provisional":true,"baseline":true,"maturity_gate_passed":false,"score_opus":0.01204370787826245,"score_gpt":0.2620476934321817,"score_spread":0.2500039855539192,"validation_status":"score_only:v0-immature-baseline","note":"Baseline scores from an immature model (maturity gate not passed). Scores rank; they never assert a category."}}