{"id":"W4403516036","doi":"10.1186/s12985-024-02508-6","title":"Resistance gene Ty-1 restricts TYLCV infection in tomato by increasing RNA silencing","year":2024,"lang":"en","type":"article","venue":"Virology Journal","topic":"Plant Virus Research Studies","field":"Agricultural and Biological Sciences","cited_by":3,"is_retracted":false,"has_abstract":true,"ca_institutions":"Université de Sherbrooke","funders":"National Natural Science Foundation of China","keywords":"RNA silencing; Biology; Nicotiana benthamiana; RNA-induced transcriptional silencing; RNA-induced silencing complex; Trans-acting siRNA; Argonaute; RNA; Gene silencing; Tomato yellow leaf curl virus; RNA interference; RNA-dependent RNA polymerase; Small interfering RNA; Virology; Genetics; Gene; Plant virus; Virus","routes":{"ca_aff":true,"ca_fund":false,"ca_venue":false,"about_ca":false,"invisible_to_affiliation_only":false},"retraction":null,"screen":null,"direct_labels":[],"prediction":{"model_version":"codex-gemma-dda1882f352a","candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0008717723,0.0001044616,0.0001502953,0.00006299443,0.0002929778,0.0001205961,0.0001346475,0.0001027676,0.00009243685],"category_scores_gemma":[0.0002886463,0.00004245162,0.00004966642,0.0004605879,0.00006353662,0.0002018454,0.00006913886,0.0005091449,0.00004596269],"about_ca_system_candidate":false,"about_ca_system_consensus":false,"about_ca_system_score_codex":0.000104313,"about_ca_system_score_gemma":0.00002088233,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_topic_score_codex":0.0004863802,"about_ca_topic_score_gemma":0.001407954,"domain_scores_codex":[0.9986753,0.0003135783,0.0002303128,0.0002042015,0.0002021455,0.0003744885],"domain_scores_gemma":[0.9993198,0.0004833017,0.00005115007,0.0000264288,0.00003041664,0.00008890629],"domain_codex":null,"domain_gemma":null,"domain_candidate":null,"domain_consensus":null,"study_design_codex":"bench_or_experimental","study_design_gemma":"observational","study_design_scores_codex":[0.00006435283,0.00002047569,0.005260397,0.000005726212,0.00001766579,0.0002278773,0.00005126652,0.000006954929,0.9736038,0.00001556165,0.01566098,0.005064926],"study_design_scores_gemma":[0.0003783871,0.0004504634,0.8652028,0.0003079825,0.00002442564,0.001376435,0.0001405315,0.0005292693,0.07844348,0.002297967,0.05041461,0.0004335905],"study_design_candidate":"bench_or_experimental","study_design_consensus":null,"genre_codex":"empirical","genre_gemma":"empirical","genre_scores_codex":[0.9913018,0.005829014,0.000008485177,0.00174998,0.0002050439,0.00006185248,0.00003851822,0.00005076025,0.0007545438],"genre_scores_gemma":[0.9955833,0.003701505,0.00005090065,0.0001283628,0.0003150041,0.000005622252,0.000008775962,0.000001054133,0.0002054964],"genre_candidate":"empirical","genre_consensus":"empirical","teacher_disagreement_score":0.8951603,"threshold_uncertainty_score":0.2253378,"prediction_status":"machine_predicted_unvalidated"},"machine_scores":{"provisional":true,"baseline":true,"maturity_gate_passed":false,"score_opus":0.02002186244354279,"score_gpt":0.2572592185498708,"score_spread":0.237237356106328,"validation_status":"score_only:v0-immature-baseline","note":"Baseline scores from an immature model (maturity gate not passed). Scores rank; they never assert a category."}}