{"id":"W4403605009","doi":"10.1128/mra.00985-24","title":"Complete genome sequence of <i>Algimonas porphyrae</i> type strain LMG 26424, a prosthecate bacterium isolated from the red alga <i>Porphyra yezoensis</i>","year":2024,"lang":"en","type":"article","venue":"Microbiology Resource Announcements","topic":"Genomics and Phylogenetic Studies","field":"Biochemistry, Genetics and Molecular Biology","cited_by":0,"is_retracted":false,"has_abstract":true,"ca_institutions":"","funders":"Université de Montréal","keywords":"Whole genome sequencing; Biology; Strain (injury); Genome; Type (biology); Alphaproteobacteria; Bacteria; Botany; Genetics; Gene; 16S ribosomal RNA; Anatomy; Ecology","routes":{"ca_aff":false,"ca_fund":true,"ca_venue":false,"about_ca":false,"invisible_to_affiliation_only":true},"retraction":null,"screen":null,"direct_labels":[],"prediction":{"model_version":"metacan-v3-hybrid-931329e0061c","candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0001871512,0.001119652,0.0008962972,0.001339623,0.000680696,0.0006607415,0.0005601702,0.0007303795,0.002008861],"category_scores_gemma":[0.0005346984,0.0003305511,0.0006244843,0.003248428,0.0002806842,0.0003521191,0.0003636964,0.001064187,0.002325068],"about_ca_system_candidate":false,"about_ca_system_consensus":false,"about_ca_system_score_codex":0.0006375195,"about_ca_system_score_gemma":0.001758117,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_topic_score_codex":0.01444939,"about_ca_topic_score_gemma":0.007998426,"domain_scores_codex":[0.9998367,0.00001553475,0.00001654145,0.00005322366,0.00004684048,0.00003107553],"domain_scores_gemma":[0.9996251,0.00004939214,0.0001159751,0.00002973832,0.0001025419,0.00007716653],"domain_codex":null,"domain_gemma":null,"domain_candidate":null,"domain_consensus":null,"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","study_design_scores_codex":[0.001298299,0.0001447824,0.004238592,0.001121996,0.00005443662,0.0005320646,0.0003552016,0.0006638293,0.9691707,0.0002940998,0.005495341,0.01663062],"study_design_scores_gemma":[0.0006052013,0.001436556,0.403026,0.0005330874,0.001017579,0.002923044,0.001439716,0.003309647,0.3123123,0.0009056342,0.2722006,0.0002906774],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","genre_codex":"empirical","genre_gemma":"empirical","genre_scores_codex":[0.5363017,0.003075935,0.009164029,0.0006324679,0.0002410501,0.000361125,0.4445673,0.0008721691,0.004784389],"genre_scores_gemma":[0.1835695,0.00270449,0.01775759,0.0002032913,0.00010428,0.000375067,0.7885758,0.0003365136,0.00637352],"genre_candidate":"empirical","genre_consensus":"empirical","teacher_disagreement_score":0.01444939,"threshold_uncertainty_score":0.02873057,"prediction_status":"machine_predicted_unvalidated"},"machine_scores":{"provisional":true,"baseline":true,"maturity_gate_passed":false,"score_opus":0.02027328640295018,"score_gpt":0.2316869489885981,"score_spread":0.2114136625856479,"validation_status":"score_only:v0-immature-baseline","note":"Baseline scores from an immature model (maturity gate not passed). Scores rank; they never assert a category."}}