{"id":"W4403703413","doi":"10.1101/2024.10.23.619922","title":"Comparative study on the virulence of mycobacteriophages","year":2024,"lang":"en","type":"preprint","venue":"bioRxiv (Cold Spring Harbor Laboratory)","topic":"Bacteriophages and microbial interactions","field":"Environmental Science","cited_by":0,"is_retracted":false,"has_abstract":true,"ca_institutions":"University of Alberta; Université de Sherbrooke","funders":"Natural Sciences and Engineering Research Council of Canada; National Institutes of Health; National Institute of Allergy and Infectious Diseases; Alberta Innovates","keywords":"Virulence; Biology; Genetics; Gene","routes":{"ca_aff":true,"ca_fund":true,"ca_venue":false,"about_ca":false,"invisible_to_affiliation_only":false},"retraction":null,"screen":null,"direct_labels":[],"prediction":{"model_version":"metacan-v3-hybrid-931329e0061c","candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0002797068,0.0004724312,0.0003363807,0.0004441286,0.0001845164,0.0004383896,0.0001984279,0.0003601647,0.0006604837],"category_scores_gemma":[0.0004296037,0.0001248258,0.0003718593,0.0003346229,0.0001439894,0.0003276408,0.0004734622,0.0004008105,0.000204113],"about_ca_system_candidate":false,"about_ca_system_consensus":false,"about_ca_system_score_codex":0.0001352546,"about_ca_system_score_gemma":0.0001081873,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_topic_score_codex":0.0006864353,"about_ca_topic_score_gemma":0.0005080483,"domain_scores_codex":[0.9995263,0.00009829981,0.00005405755,0.00006708747,0.0001658396,0.00008838824],"domain_scores_gemma":[0.9996038,0.0001276573,0.0000652068,0.00003393172,0.0001073393,0.00006203035],"domain_codex":null,"domain_gemma":null,"domain_candidate":null,"domain_consensus":null,"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","study_design_scores_codex":[0.00005944376,0.00003852984,0.001154272,0.00003098252,0.00000717349,0.00002742481,0.00002902896,0.00003291599,0.9978094,0.00001490279,0.00001128626,0.0007846813],"study_design_scores_gemma":[0.00001103406,0.00276026,0.06038307,0.0000198201,0.00004850596,0.0004399898,0.0003022835,0.001182294,0.9337546,0.00004115572,0.001038284,0.00001877613],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","genre_codex":"empirical","genre_gemma":"empirical","genre_scores_codex":[0.9985968,0.0003652532,0.0004509804,0.00001731485,0.00000845852,0.00001576068,0.0001275362,0.000007833019,0.0004099317],"genre_scores_gemma":[0.9963489,0.000287956,0.001653869,0.00002627084,0.00000706952,0.000022142,0.0005529654,0.000007810051,0.001092982],"genre_candidate":"empirical","genre_consensus":"empirical","teacher_disagreement_score":0.0006864353,"threshold_uncertainty_score":0.002209544,"prediction_status":"machine_predicted_unvalidated"},"machine_scores":{"provisional":true,"baseline":true,"maturity_gate_passed":false,"score_opus":0.0217401284210781,"score_gpt":0.2519778946908319,"score_spread":0.2302377662697538,"validation_status":"score_only:v0-immature-baseline","note":"Baseline scores from an immature model (maturity gate not passed). Scores rank; they never assert a category."}}