{"id":"W4404039607","doi":"10.3390/insects15110858","title":"Insight into the Phylogenetic Relationships of Phasmatodea and Selection Pressure Analysis of Phraortes liaoningensis Chen &amp; He, 1991 (Phasmatodea: Lonchodidae) Using Mitogenomes","year":2024,"lang":"en","type":"article","venue":"Insects","topic":"Insect and Arachnid Ecology and Behavior","field":"Biochemistry, Genetics and Molecular Biology","cited_by":5,"is_retracted":false,"has_abstract":true,"ca_institutions":"Carleton University","funders":"Natural Science Foundation of Zhejiang Province; National Natural Science Foundation of China","keywords":"Biology; Phylogenetic tree; Evolutionary biology; Selection (genetic algorithm); Zoology; Genetics; Gene","routes":{"ca_aff":true,"ca_fund":false,"ca_venue":false,"about_ca":false,"invisible_to_affiliation_only":false},"retraction":null,"screen":null,"direct_labels":[],"prediction":{"model_version":"codex-gemma-dda1882f352a","candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0002234426,0.0001531572,0.0002475303,0.0002051117,0.000190539,0.00002375055,0.0001070701,0.0002085635,0.00002992287],"category_scores_gemma":[0.00004515567,0.0001189373,0.0001411658,0.0005753239,0.0001661673,0.00000946422,0.00006309019,0.0001526014,0.000001525569],"about_ca_system_candidate":false,"about_ca_system_consensus":false,"about_ca_system_score_codex":0.000008586538,"about_ca_system_score_gemma":0.00005739863,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_topic_score_codex":0.0001396089,"about_ca_topic_score_gemma":0.0007418941,"domain_scores_codex":[0.9990358,0.0001284614,0.0002900703,0.0002885453,0.0001001244,0.00015697],"domain_scores_gemma":[0.9995152,0.00005100021,0.0001155833,0.0001864757,0.00009540973,0.00003629156],"domain_codex":null,"domain_gemma":null,"domain_candidate":null,"domain_consensus":null,"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","study_design_scores_codex":[0.00003668803,0.0000566641,0.1581209,0.00008187266,0.001104669,0.000001478398,0.001873911,0.0008092601,0.8371356,0.00004942241,0.00005204538,0.0006775103],"study_design_scores_gemma":[0.0004451571,0.0002784049,0.1863991,0.00007309841,0.006052303,0.00005168756,0.0001814575,0.006223184,0.7930803,0.000203238,0.00659844,0.00041367],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","genre_codex":"empirical","genre_gemma":"empirical","genre_scores_codex":[0.9855825,0.0136602,0.0003356715,0.0000534426,0.00009357367,0.0001544299,0.00001720861,0.0000137699,0.00008921677],"genre_scores_gemma":[0.9987225,0.0002421517,0.0005678891,0.00002916211,0.00008358974,0.00001405077,0.00008357853,0.00001641279,0.0002406672],"genre_candidate":"empirical","genre_consensus":"empirical","teacher_disagreement_score":0.04405526,"threshold_uncertainty_score":0.4850123,"prediction_status":"machine_predicted_unvalidated"},"machine_scores":{"provisional":true,"baseline":true,"maturity_gate_passed":false,"score_opus":0.02500485497380707,"score_gpt":0.2780681905996414,"score_spread":0.2530633356258344,"validation_status":"score_only:v0-immature-baseline","note":"Baseline scores from an immature model (maturity gate not passed). Scores rank; they never assert a category."}}