{"id":"W4404108780","doi":"10.1128/mra.00563-24","title":"Complete genome sequence of <i>Flavobacterium</i> <scp>s</scp> p. strain CFS9, a potential fish probiotic isolated from the body surface of <i>Silurus asotus</i>","year":2024,"lang":"en","type":"article","venue":"Microbiology Resource Announcements","topic":"Genomics and Phylogenetic Studies","field":"Biochemistry, Genetics and Molecular Biology","cited_by":1,"is_retracted":false,"has_abstract":true,"ca_institutions":"","funders":"Institute of Genetics; JST-Mirai Program; Japan Science and Technology Agency; Ministry of Education, Culture, Sports, Science and Technology","keywords":"Whole genome sequencing; Probiotic; Strain (injury); Flavobacterium; Biology; Genome; Fish <Actinopterygii>; Open reading frame; Gene; Genetics; Microbiology; Fishery; Bacteria; Anatomy; Peptide sequence","routes":{"ca_aff":false,"ca_fund":true,"ca_venue":false,"about_ca":false,"invisible_to_affiliation_only":true},"retraction":null,"screen":null,"direct_labels":[],"prediction":{"model_version":"metacan-v3-hybrid-931329e0061c","candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0001776157,0.0008690465,0.0006227259,0.001216362,0.0006347849,0.00055479,0.0003999908,0.0005023834,0.002284555],"category_scores_gemma":[0.0005217514,0.0002589014,0.0008230712,0.001767313,0.0002040029,0.0003520483,0.0004652399,0.0009004184,0.00174847],"about_ca_system_candidate":false,"about_ca_system_consensus":false,"about_ca_system_score_codex":0.0004883982,"about_ca_system_score_gemma":0.001381833,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_topic_score_codex":0.008205881,"about_ca_topic_score_gemma":0.007366927,"domain_scores_codex":[0.9998657,0.00001115273,0.00001350211,0.0000387151,0.00004315227,0.0000278586],"domain_scores_gemma":[0.9996177,0.00006901015,0.00009055681,0.00003280098,0.0001182741,0.00007161338],"domain_codex":null,"domain_gemma":null,"domain_candidate":null,"domain_consensus":null,"study_design_codex":"bench_or_experimental","study_design_gemma":"not_applicable","study_design_scores_codex":[0.0009475874,0.00009260481,0.004824354,0.0007833605,0.0000628483,0.0007384616,0.0001871969,0.000741154,0.9709309,0.0003138031,0.001869614,0.01850804],"study_design_scores_gemma":[0.0002671049,0.001278337,0.4179921,0.0005427261,0.0010395,0.003340378,0.00129479,0.006911296,0.4107783,0.001464939,0.1548436,0.0002468898],"study_design_candidate":"not_applicable","study_design_consensus":null,"genre_codex":"empirical","genre_gemma":"dataset","genre_scores_codex":[0.7229647,0.005077093,0.03069827,0.0008443648,0.0003911046,0.0003845516,0.2331681,0.0007563937,0.005715361],"genre_scores_gemma":[0.3783963,0.003364406,0.04718823,0.0002243099,0.0001123164,0.0003005073,0.5637013,0.000303261,0.006409292],"genre_candidate":"dataset","genre_consensus":null,"teacher_disagreement_score":0.008205881,"threshold_uncertainty_score":0.01631624,"prediction_status":"machine_predicted_unvalidated"},"machine_scores":{"provisional":true,"baseline":true,"maturity_gate_passed":false,"score_opus":0.01159864312054024,"score_gpt":0.2170071974533513,"score_spread":0.2054085543328111,"validation_status":"score_only:v0-immature-baseline","note":"Baseline scores from an immature model (maturity gate not passed). Scores rank; they never assert a category."}}