{"id":"W4404160972","doi":"10.5376/rgg.2024.15.0021","title":"Genomic Evolution in &lt;i&gt;Oryza&lt;/i&gt;: The Role of Novel Genetic Elements","year":2024,"lang":"en","type":"article","venue":"Rice Genomics and Genetics","topic":"Genetic Mapping and Diversity in Plants and Animals","field":"Biochemistry, Genetics and Molecular Biology","cited_by":0,"is_retracted":false,"has_abstract":true,"ca_institutions":"","funders":"","keywords":"Genetics; Biology; Oryza; Evolutionary biology; Oryza sativa; Gene","routes":{"ca_aff":false,"ca_fund":false,"ca_venue":true,"about_ca":false,"invisible_to_affiliation_only":true},"retraction":null,"screen":null,"direct_labels":[],"prediction":{"model_version":"metacan-v3-hybrid-931329e0061c","candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0001680769,0.0002028477,0.0001873996,0.0004593856,0.0001821725,0.0003031985,0.0002337292,0.0002170842,0.0005469653],"category_scores_gemma":[0.0001588387,0.0001233493,0.0002702814,0.0004633795,0.0002603271,0.0003467018,0.0003417491,0.0004451458,0.0001572619],"about_ca_system_candidate":false,"about_ca_system_consensus":false,"about_ca_system_score_codex":0.0004820944,"about_ca_system_score_gemma":0.0002935141,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_topic_score_codex":0.001030219,"about_ca_topic_score_gemma":0.0009592893,"domain_scores_codex":[0.9999162,0.000007508687,0.000008700035,0.00003885307,0.00001257168,0.00001615864],"domain_scores_gemma":[0.9998481,0.00002379331,0.00007035358,0.00002270887,0.00001281417,0.00002219807],"domain_codex":null,"domain_gemma":null,"domain_candidate":null,"domain_consensus":null,"study_design_codex":"bench_or_experimental","study_design_gemma":"observational","study_design_scores_codex":[0.0000965202,0.00001482996,0.006395325,0.0000342793,0.00001217674,0.0001111364,0.00008960401,0.0002310672,0.9841763,0.0005490903,0.00002660256,0.008263026],"study_design_scores_gemma":[0.00007082117,0.0005322298,0.6423374,0.00005083812,0.0002213424,0.00264735,0.0006374744,0.005860396,0.3250601,0.002702064,0.01981851,0.00006144817],"study_design_candidate":"observational","study_design_consensus":null,"genre_codex":"empirical","genre_gemma":"empirical","genre_scores_codex":[0.9955409,0.0004293005,0.003011596,0.00006688042,0.000005906824,0.000008617671,0.0003360386,0.00007171335,0.0005289473],"genre_scores_gemma":[0.9919561,0.0004261695,0.005178775,0.00007641243,0.0000111191,0.00002035019,0.001091563,0.00005174043,0.001187703],"genre_candidate":"empirical","genre_consensus":"empirical","teacher_disagreement_score":0.001030219,"threshold_uncertainty_score":0.003497899,"prediction_status":"machine_predicted_unvalidated"},"machine_scores":{"provisional":true,"baseline":true,"maturity_gate_passed":false,"score_opus":0.007495881371780278,"score_gpt":0.2069022019023211,"score_spread":0.1994063205305408,"validation_status":"score_only:v0-immature-baseline","note":"Baseline scores from an immature model (maturity gate not passed). Scores rank; they never assert a category."}}