{"id":"W4404248995","doi":"10.1017/ice.2024.178","title":"Transmission of MRSA, ESBL <i>E. coli</i>, and <i>C. difficile</i> within a tertiary care hospital and across surrounding facilities in Japan: a molecular epidemiological study with the PCR-based Open-reading frame typing","year":2024,"lang":"en","type":"article","venue":"Infection Control and Hospital Epidemiology","topic":"Urinary Tract Infections Management","field":"Medicine","cited_by":2,"is_retracted":false,"has_abstract":true,"ca_institutions":"University of Toronto","funders":"Japan Society for the Promotion of Science","keywords":"Epidemiology; Tertiary care; Molecular epidemiology; Transmission (telecommunications); C difficile; University hospital; Medicine; Microbiology; Virology; Family medicine; Clostridium difficile; Internal medicine; Biology; Genotype; Antibiotics; Telecommunications; Genetics; Computer science; Gene","routes":{"ca_aff":true,"ca_fund":false,"ca_venue":false,"about_ca":false,"invisible_to_affiliation_only":false},"retraction":null,"screen":null,"direct_labels":[],"prediction":{"model_version":"metacan-v3-hybrid-931329e0061c","candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0004717157,0.0004050645,0.0003114046,0.0009426964,0.0007632704,0.0008690871,0.0004727143,0.0005020076,0.001381238],"category_scores_gemma":[0.001251404,0.0006837923,0.0005412974,0.001018945,0.0004739953,0.0006429502,0.0008416501,0.0005037829,0.00023208],"about_ca_system_candidate":false,"about_ca_system_consensus":false,"about_ca_system_score_codex":0.0008249572,"about_ca_system_score_gemma":0.0007124742,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_topic_score_codex":0.01438425,"about_ca_topic_score_gemma":0.01494132,"domain_scores_codex":[0.9992622,0.0001228544,0.0001091198,0.0002018103,0.0001236051,0.0001803981],"domain_scores_gemma":[0.9983642,0.000139358,0.0008475458,0.0001028361,0.0001800034,0.0003662574],"domain_codex":null,"domain_gemma":null,"domain_candidate":null,"domain_consensus":null,"study_design_codex":"observational","study_design_gemma":"observational","study_design_scores_codex":[0.00003695448,0.00002194804,0.9991711,0.000005098778,0.00001809911,0.0001053899,0.0001381073,0.000005711373,0.0002387933,0.000002949939,0.00001972109,0.0002361529],"study_design_scores_gemma":[0.000005097473,0.0001007074,0.9984848,0.000005900361,0.00001887532,0.0004191136,0.0007698312,0.0000685121,0.00007060161,0.000002927874,0.0000499272,0.000003648576],"study_design_candidate":"observational","study_design_consensus":"observational","genre_codex":"empirical","genre_gemma":"empirical","genre_scores_codex":[0.9998358,0.00003406379,0.00002674241,0.000007462427,0.000001184124,0.000004860582,0.00004841261,6.48652e-7,0.00004060489],"genre_scores_gemma":[0.9997324,0.00004678055,0.00004789737,0.00001859461,0.000005013389,0.000006163223,0.00009899978,8.106222e-7,0.00004322614],"genre_candidate":"empirical","genre_consensus":"empirical","teacher_disagreement_score":0.01438425,"threshold_uncertainty_score":0.02860105,"prediction_status":"machine_predicted_unvalidated"},"machine_scores":{"provisional":true,"baseline":true,"maturity_gate_passed":false,"score_opus":0.01752819623356903,"score_gpt":0.3109103905936204,"score_spread":0.2933821943600514,"validation_status":"score_only:v0-immature-baseline","note":"Baseline scores from an immature model (maturity gate not passed). Scores rank; they never assert a category."}}